Transcript Information: R_Transcript_123982.p1


Annotated TAIR IDAT1G03600.1
Annotated Gene Namephotosystem II family protein
Annotated Gene Symbol(s)PSB27
Annotation TypeOrtholog
Chromosome Positionchr1:898916-899440 | Forward length=174
E-Value6.2E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8720985594583
Replicate 20.96906001921376
Replicate 31.0572340428993
Condition 2: 8 Hour
Replicate 11.381253920101
Replicate 20.91736951143325
Replicate 30.74468146134921
Condition 3: 24 Hour
Replicate 10.70639406854474
Replicate 20.33931167523965
Replicate 30.44897855767994


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_123982.p1 GENE.R_Transcript_123982~~R_Transcript_123982.p1 ORF type:complete len:195 (+),score=36.86,PSII_Pbs27|PF13326.2|6.8e-31 R_Transcript_123982:52-585(+)
ATGGCCTCCCCTGCCTTGATCACCCCAACTTCCAAGCCCAAAACACTCCCTTCAAACCCCATAAAATCCAGACTCACCACTAATATCACTAACACCTCTGTCGCTCCACCTGCCACCACAGCCACCGCCCTCAGCCGTCGCCAGCTCACCGCGACCGCCCTTGCGGCCGCCATTCTCTCTCCTGCACTTCTATCACCCGCCGCTGCCTGGGCCTCCTCTGACGAGGAATACGTAAATGAGACAAAGGAGGTGATCAACAAGGTCCGGAGTACCATCACTATGGACAGAAATGACCCAAATGTGGCTGATGCAGTTGCCGAGCTTAGAGAAACTTCCAACTCATGGGTTGCTAAGTATAGGAGAGAGAAGGCTCTTCTTGGCAGGGTTTCTTTCCGGGACATTTACTCCGCCCTCAATGCTGTTTCTGGCCATTACATTAGTTTTGGACCTACTGCTCCTATCCCTGCTAAGAGGAGGGCTAGGATCTTGGAGGAGATGGATACTGCTGAAAAGGCTTTATTAAGAGGGAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_123982.p1 GENE.R_Transcript_123982~~R_Transcript_123982.p1 ORF type:complete len:195 (+),score=36.86,PSII_Pbs27|PF13326.2|6.8e-31 R_Transcript_123982:52-585(+)
MASPALITPTSKPKTLPSNPIKSRLTTNITNTSVAPPATTATALSRRQLTATALAAAILSPALLSPAAAWASSDEEYVNETKEVINKVRSTITMDRNDPNVADAVAELRETSNSWVAKYRREKALLGRVSFRDIYSALNAVSGHYISFGPTAPIPAKRRARILEEMDTAEKALLRGR*

Click here to download the sequence:
Link to NCBI Protein BLAST