Transcript Information: R_Transcript_124000.p1


Annotated TAIR IDAT5G56310.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22802322-22803914 | Forward length=530
E-Value2E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26646658328057
Replicate 20.15325766727225
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.13249350817801
Condition 3: 24 Hour
Replicate 10.50272570571615
Replicate 20.48296187351629
Replicate 30.47929280336272


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_124000.p1 GENE.R_Transcript_124000~~R_Transcript_124000.p1 ORF type:3prime_partial len:137 (+),score=38.51,PPR_2|PF13041.2|6.2e-07,PPR_2|PF13041.2|4.2e-05,PPR_2|PF13041.2|5e-10,PPR|PF01535.16|0.00013,PPR|PF01535.16|45,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|1.4e-06,PPR_1|PF12854.3|3.7,PPR_1|PF12854.3|2e+02,PPR_1|PF12854.3|0.00045,PPR_1|PF12854.3|0.00016,PPR_1|PF12854.3|3.7e+02,PPR_3|PF13812.2|12,PPR_3|PF13812.2|8.8e+02,PPR_3|PF13812.2|0.00078,PPR_3|PF13812.2|0.02 R_Transcript_124000:72-479(+)
ATGGTTTGTGGGTATGCTCAGAATGATTGTTTTAATGAGGCTCTAATGTTGTTTAATCAAATGGTTGCTTGTGGGGTTGAGCCAAATGGGGCGACTTTGGCGTCTGTGCTGTCGGCTTGTGCTCAGGAAGGGTGTTTAATGATAGGGGAAAGGATTGAGAAGTTCCTGAAAGAGAGAGGGGTTGAGTTGGGGGTGATTCTTGGGACTGCGTTAGTTGACATGTATGCAAAGAATGGAGCTGTGAATAAGGCTATGGAGGTGTTTGATGCTATGCAAGAGAAGAATGTTGCGACATGGAATGCCATGATTCATGGGTTAGCTGTTCATGGGCATAGTGCAGAAGCTCTGAAACTTTTCAGGAAGCTTGAGATAGACGGAATCACTCCTAATGGCATTACATTTGTTGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_124000.p1 GENE.R_Transcript_124000~~R_Transcript_124000.p1 ORF type:3prime_partial len:137 (+),score=38.51,PPR_2|PF13041.2|6.2e-07,PPR_2|PF13041.2|4.2e-05,PPR_2|PF13041.2|5e-10,PPR|PF01535.16|0.00013,PPR|PF01535.16|45,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|1.4e-06,PPR_1|PF12854.3|3.7,PPR_1|PF12854.3|2e+02,PPR_1|PF12854.3|0.00045,PPR_1|PF12854.3|0.00016,PPR_1|PF12854.3|3.7e+02,PPR_3|PF13812.2|12,PPR_3|PF13812.2|8.8e+02,PPR_3|PF13812.2|0.00078,PPR_3|PF13812.2|0.02 R_Transcript_124000:72-479(+)
MVCGYAQNDCFNEALMLFNQMVACGVEPNGATLASVLSACAQEGCLMIGERIEKFLKERGVELGVILGTALVDMYAKNGAVNKAMEVFDAMQEKNVATWNAMIHGLAVHGHSAEALKLFRKLEIDGITPNGITFVV

Click here to download the sequence:
Link to NCBI Protein BLAST