Transcript Information: R_Transcript_124048.p2


Annotated TAIR IDAT1G09280.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:2998209-3001253 | Reverse length=581
E-Value7E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6177039730073
Replicate 24.7288964901572
Replicate 33.9209731020441
Condition 2: 8 Hour
Replicate 14.4118675580622
Replicate 24.2304371050892
Replicate 34.2517286137843
Condition 3: 24 Hour
Replicate 14.343368934971
Replicate 25.3647927031134
Replicate 33.3521709880834


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_124048.p2 GENE.R_Transcript_124048~~R_Transcript_124048.p2 ORF type:complete len:111 (+),score=21.49,FSH1|PF03959.9|8.7e-22 R_Transcript_124048:1635-1967(+)
ATGTTGGGGTTTTCACAGGGAGCTGCAATGGCTGCTCTTCTGTGTGCAAAAAGAGCAGACCTGGAATTAGACTTTAGATTTGTTATTTTGTGTTCTGGATTTGCTGTTAACTTGGATGAATACAGTAAAGGATCCATTACTTGCCCCTCGCTTCATGTTTTTGGAAATGAGAAGGGACGAGACCGGCAGATATCATCTGATACCAGCAGGGATCTTGCATCTTATTTTGAAGATGGATGTCGAGTGATTATTGAGCATCCATCTGGTCATATAATTCCTACGCAGCCTCCATACATTGAGGAGGTTCGGGATTTTCTTAGGCGTTTTATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_124048.p2 GENE.R_Transcript_124048~~R_Transcript_124048.p2 ORF type:complete len:111 (+),score=21.49,FSH1|PF03959.9|8.7e-22 R_Transcript_124048:1635-1967(+)
MLGFSQGAAMAALLCAKRADLELDFRFVILCSGFAVNLDEYSKGSITCPSLHVFGNEKGRDRQISSDTSRDLASYFEDGCRVIIEHPSGHIIPTQPPYIEEVRDFLRRFI*

Click here to download the sequence:
Link to NCBI Protein BLAST