Transcript Information: R_Transcript_124049.p1


Annotated TAIR IDAT1G09280.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2998209-3001253 | Reverse length=581
E-Value2.4E-172
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9243866052645
Replicate 21.7321947843446
Replicate 31.2598705677884
Condition 2: 8 Hour
Replicate 12.3261571699883
Replicate 22.2919903887215
Replicate 33.8572172568322
Condition 3: 24 Hour
Replicate 14.419377891333
Replicate 23.7493940113981
Replicate 34.1039446287932


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_124049.p1 GENE.R_Transcript_124049~~R_Transcript_124049.p1 ORF type:3prime_partial len:400 (+),score=76.55,Rhodanese_C|PF12368.4|2.8e-14 R_Transcript_124049:136-1332(+)
ATGGCAGAAAACAACAAGGCAGAAAACGGGGTTCTATTATACTACAAGTACACCGAAACGCCAATCCAAGACCTCAACAAACTCTACACTTTCTACGAATCCAACTGCACTTCTCTCGGCCTACTTGGCCGAGTCAGACTCGCCCCACAAGGTGTCAATGTCACCATTGGTGGAAAGCTTTCATCTTTACAATCCCACATTGATGCTTTGCTCAAAGAAAATAAGGGTCTTTTCGAAGGCACTGATTTCAAGCTTGCAACTTGTGATGAACCCTTGAATGATGAGGTTGCTAGGGAATGTGGGTTCACTTCTCTTTCCATTAGGGTTGTGAAGGAATTGGTTACGCTTTGCTCTAACCCGCTTTTGAAGGCTCCTTCCGTTTCTAATGCGGGCAGGCATCTTTCTGCTGCTGAATTTCATTCTGTTCTTCAGAGTGATGGAGAGCTTTTGAAAGAGGAGTCGCCAATTGACTTTAAAAAGCTTGTTCTACTGGATGCAAGGAACTTGTATGAAACAAGAATAGGGAAGTTTGACTCTCCAAATGTAGAAACATTGGATCCAGCTACTAGGCAATATAGTGATCTGCCTGCCTGGATAGACAGCAACGCTGAGATGTTGCGAGGCAATTGTGTTCTCATGTATTGTACAGGAGGAATAAGGTGTGAGATGGCATCTGCTTATATTAAGTCAAAAGGTTCTGGGTTTGAGAATGTATTTCAGTTGTATGGCGGGATACAGCGATATCTAGAACAGTTTCCAGATGGTGGCTTCTTCAAGGGGAAGAATTTTGTGTATGATCACCGGATCTCTGTTGGGAGTTCAAACGAATTGATTATGGGTAAATGCCTTCTTTGTGGAGTCTCTTTTGATGATTACTCATCTCGCTGCCGTTGTACCTTTTGTCGCATGCTTGTTTTGGTCTGCAATGATTGTCAGAAGGAGAGTCAACAATATGTGTGTGAGTTGTGCCAGAATCATGGTAAAGTTATCCAGTGTGCTCCTTCAGCTAATGGTGATAGTCCAGAAACAACTCTGGCATGTGATATTGCAGCAGTCCCGAATGGATCCCCTTGCCATCTTAGCACAAGCCAAATTCAAGTTTCCTGCAGTCCTGGGCCTTCAAAGAAACTCCGAATATTGTGTCTTCATGGATTTCGCCAGAATGCCTCTAGTTTCAAAGGAAGGACTGCAGCATTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_124049.p1 GENE.R_Transcript_124049~~R_Transcript_124049.p1 ORF type:3prime_partial len:400 (+),score=76.55,Rhodanese_C|PF12368.4|2.8e-14 R_Transcript_124049:136-1332(+)
MAENNKAENGVLLYYKYTETPIQDLNKLYTFYESNCTSLGLLGRVRLAPQGVNVTIGGKLSSLQSHIDALLKENKGLFEGTDFKLATCDEPLNDEVARECGFTSLSIRVVKELVTLCSNPLLKAPSVSNAGRHLSAAEFHSVLQSDGELLKEESPIDFKKLVLLDARNLYETRIGKFDSPNVETLDPATRQYSDLPAWIDSNAEMLRGNCVLMYCTGGIRCEMASAYIKSKGSGFENVFQLYGGIQRYLEQFPDGGFFKGKNFVYDHRISVGSSNELIMGKCLLCGVSFDDYSSRCRCTFCRMLVLVCNDCQKESQQYVCELCQNHGKVIQCAPSANGDSPETTLACDIAAVPNGSPCHLSTSQIQVSCSPGPSKKLRILCLHGFRQNASSFKGRTAAL

Click here to download the sequence:
Link to NCBI Protein BLAST