Transcript Information: R_Transcript_124051.p2


Annotated TAIR IDAT1G09280.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:2998209-3001253 | Reverse length=581
E-Value3E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2948143422868
Replicate 22.8501765270993
Replicate 33.5241134763311
Condition 2: 8 Hour
Replicate 12.8806899937935
Replicate 23.1365942854152
Replicate 33.2032254035977
Condition 3: 24 Hour
Replicate 13.7397333040604
Replicate 24.1914971647251
Replicate 34.0606148966642


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_124051.p2 GENE.R_Transcript_124051~~R_Transcript_124051.p2 ORF type:3prime_partial len:221 (+),score=37.28,FSH1|PF03959.9|2.6e-43 R_Transcript_124051:1739-2398(+)
ATGTTGTGTCTTCATGGATTTCGTCAGAATGCCTCTAGTTTCAAAGGAAGGACTGCAGCATTAGCGAAAAAACTTAAAAGCTTGGCCGAGCTTGTTTTTGTTGATGCCCCTCATGAGTTGCCATTTATATACCAACCAACCACCATACTTAACGGTGGAAAACAAAGTCTACCTCAGCATCCACCACCAACAAACTGCAACAAAAAGTACGCATGGCTGGTAGCTCCTGACGTCTTTAGGAAGAAAGCGATTGAATGGGAAACGACTGAGACGCCGTTTGATCCTCTTCAGTATCAGCGGCAAACTGAGGGGTTCAATGAATCGTTATCATATCTGAAATCCATTGTCTCTGAGAAGGGGCCATTTGATGGGATGTTGGGGTTTTCACAGGGAGCTGCAATGGCTGCTCTTCTGTGTGCAAAAAGAGCAGACCTGGAATTAGACTTTAGATTTGTTATTTTGTGTTCTGGATTTGCTGTTAACTTGGATGAATACAGTAAAGGATCCATTACTTGCCCCTCGCTTCATGTTTTTGGAAATGAGAAGGGACGAGACCGGCAGATATCATCTGATACCAGCAGGGATCTTGCATCTTATTTTGAAGATGGATGTCGAGTGATTATTGAGCATCCATCTGGTCATATAATTCCTACGCAGCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_124051.p2 GENE.R_Transcript_124051~~R_Transcript_124051.p2 ORF type:3prime_partial len:221 (+),score=37.28,FSH1|PF03959.9|2.6e-43 R_Transcript_124051:1739-2398(+)
MLCLHGFRQNASSFKGRTAALAKKLKSLAELVFVDAPHELPFIYQPTTILNGGKQSLPQHPPPTNCNKKYAWLVAPDVFRKKAIEWETTETPFDPLQYQRQTEGFNESLSYLKSIVSEKGPFDGMLGFSQGAAMAALLCAKRADLELDFRFVILCSGFAVNLDEYSKGSITCPSLHVFGNEKGRDRQISSDTSRDLASYFEDGCRVIIEHPSGHIIPTQP

Click here to download the sequence:
Link to NCBI Protein BLAST