Transcript Information: R_Transcript_12417.p2


Annotated TAIR IDAT4G39820.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:18476698-18477924 | Reverse length=408
E-Value5E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0182061421189
Replicate 20.99195120076999
Replicate 31.0822080754088
Condition 2: 8 Hour
Replicate 13.0848333791805
Replicate 22.2889091648458
Replicate 34.8594863078201
Condition 3: 24 Hour
Replicate 13.7961728486755
Replicate 22.2576249258071
Replicate 33.1021943650721


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12417.p2 GENE.R_Transcript_12417~~R_Transcript_12417.p2 ORF type:5prime_partial len:127 (+),score=5.90 R_Transcript_12417:1-381(+)
CCGAAATCGGTCCAAGGCCAGGCCAGGGCGACCCTTCTTCATCCTCTCTCTTCTCCTCCCAAATTCTCTCTCATCTTCCACCTCAATGGACTCACCATCACCGTCACCGGAATCTTCCACCACCACCGCAACCACCGAATCGACAAACGCAACCAACGAGGGACCAGAGGTTCTAATAAGCCAAGAAGCATCATCCCTACAAGAGCTAGCCATAAGAGGATCATGGCGAACAATCCTAGACAAAGTGAGCCGAGCCCGGTCACTCTCTCTGATCTGCTACCCCCACGACCACCTCGTTTTCCTGACCTTCAACGCCATTGCTCTCACCAAACTCCGCCGCTACTCAGAAGCCCTGGAATACATTCAATCCTCCCTCGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12417.p2 GENE.R_Transcript_12417~~R_Transcript_12417.p2 ORF type:5prime_partial len:127 (+),score=5.90 R_Transcript_12417:1-381(+)
PKSVQGQARATLLHPLSSPPKFSLIFHLNGLTITVTGIFHHHRNHRIDKRNQRGTRGSNKPRSIIPTRASHKRIMANNPRQSEPSPVTLSDLLPPRPPRFPDLQRHCSHQTPPLLRSPGIHSILPR*

Click here to download the sequence:
Link to NCBI Protein BLAST