Transcript Information: R_Transcript_12418.p1


Annotated TAIR IDAT4G39820.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:18476698-18477924 | Reverse length=408
E-Value6E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.415758775152
Replicate 22.2101368859261
Replicate 32.6791505960412
Condition 2: 8 Hour
Replicate 13.4366126241748
Replicate 24.3152578991762
Replicate 34.2459907883946
Condition 3: 24 Hour
Replicate 15.6387596699624
Replicate 23.4824092985122
Replicate 34.9919326478889


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12418.p1 GENE.R_Transcript_12418~~R_Transcript_12418.p1 ORF type:5prime_partial len:171 (+),score=8.77 R_Transcript_12418:3-515(+)
GAAATCGGTCCAAGGCCAGGCCAGGGCGACCCTTCTTCATTCTCTCTCCTCTCCTCCCAAACTCTCTCTCTCTCATCTTCCGTCTCAATGGACTCACCATCACCGTCACCGGAATCTTCCACCACCACCACAACCATCGTATCGACAACCACAACCAACGAGGGACCAGAGGTTCTAATAAGCCAAGAAGCATCATCCCTACAAGAGCTAGCCATAAGAGGATCATGGCGAACAATCCTAGACAAAGTGAGCCGAGCCCGGTCACTCTCTCTGATCTGCTACCCCCACGACCACCTCGTTTTCCTGACCTTCAACGCCATTGCTCTCACCAAACTCCGCCGCTACTTAGAAGCCCTCGAAGACATTCAATCCTCCCTCGATAACAACCTCGACAGCCCCTCCTTTCGCTACGAAGCTTACCCCCACATTTACCCTAAATCGAAAAGGCTCCATGATCCCTTTCTCTCTCCGCTGGCTCCACGCTCTCCTCCCCTCCTTTCTCAAGTCCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12418.p1 GENE.R_Transcript_12418~~R_Transcript_12418.p1 ORF type:5prime_partial len:171 (+),score=8.77 R_Transcript_12418:3-515(+)
EIGPRPGQGDPSSFSLLSSQTLSLSSSVSMDSPSPSPESSTTTTTIVSTTTTNEGPEVLISQEASSLQELAIRGSWRTILDKVSRARSLSLICYPHDHLVFLTFNAIALTKLRRYLEALEDIQSSLDNNLDSPSFRYEAYPHIYPKSKRLHDPFLSPLAPRSPPLLSQVL*

Click here to download the sequence:
Link to NCBI Protein BLAST