Transcript Information: R_Transcript_12419.p1


Annotated TAIR IDAT4G39820.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:18476698-18477924 | Reverse length=408
E-Value3.6E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.990197200002
Replicate 215.443559810335
Replicate 316.186165822075
Condition 2: 8 Hour
Replicate 114.165376415762
Replicate 219.773672371957
Replicate 318.226617275843
Condition 3: 24 Hour
Replicate 121.250201731429
Replicate 219.59454818791
Replicate 318.360347320001


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12419.p1 GENE.R_Transcript_12419~~R_Transcript_12419.p1 ORF type:complete len:242 (+),score=27.90,TPR_11|PF13414.2|11,TPR_11|PF13414.2|0.47,TPR_11|PF13414.2|1.8e-07,TPR_2|PF07719.13|0.16,TPR_2|PF07719.13|0.28,TPR_2|PF07719.13|0.46,TPR_1|PF00515.24|1.4,TPR_1|PF00515.24|0.41,TPR_1|PF00515.24|0.84,TPR_12|PF13424.2|6.8,TPR_12|PF13424.2|0.0028 R_Transcript_12419:450-1175(+)
ATGATCCCTTTCTCTCTCCGCTGGCTCCACGCTCTCCTCCCCTCCTTTCTCAAGTCCTCTGACTCCCTTGATCGCCTCTACCTCCTCCTCGCTTACGTCAGATCCCACCTTGCTGACTCATCATCATCGTCATCTCGCGTCTGGCGGAGGAGAGAGAATTTAGTCCTGGGCACTCTCGTTAGCCTCCACTCGAGCCAAAAGGAGTTCGGCGTGTGTTTGTCTCTCATCAAAGAAATGCTCGACGGTGACTTCAACAATCCGTCATTGCTGTCCAAGCTAGGGTACATCCAGCTCCAGTACGGCGACCTGGAAGGGGCGAAATCGTCATTTGACCAAGCCGAGAAACTCATCAAGGACAAATCCTCGATCGAGAATCTTAACCTTGTGGCTCGTAACAAGGCGTTGATATATTTGGTGGCTAAGGATTATGTTTCCGCGGTTAGGGAGTATGATGAGTGTATTGAAAGAGATGGTTCGGATGGGGTGGCTATTAATAATAAGGCGTTGTGTTTGATGTACTTGAGGGATTTGTCTGATTCCATTAAGGTTTTGGAGAATTCGCTGGAGAGAGTGCCTACTGTGGCTCTTAATGAGACGCTTGTTGTGAATCTTTGTTCTATGTATGAATTGGCCTTTGTTAATCATTCTGATCTTAAGAGGACTCTCAGTAAGTGGATCGCTCGTGTCGCTCCTGATGATTTTGATTCCTCCTGTACTCGCATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12419.p1 GENE.R_Transcript_12419~~R_Transcript_12419.p1 ORF type:complete len:242 (+),score=27.90,TPR_11|PF13414.2|11,TPR_11|PF13414.2|0.47,TPR_11|PF13414.2|1.8e-07,TPR_2|PF07719.13|0.16,TPR_2|PF07719.13|0.28,TPR_2|PF07719.13|0.46,TPR_1|PF00515.24|1.4,TPR_1|PF00515.24|0.41,TPR_1|PF00515.24|0.84,TPR_12|PF13424.2|6.8,TPR_12|PF13424.2|0.0028 R_Transcript_12419:450-1175(+)
MIPFSLRWLHALLPSFLKSSDSLDRLYLLLAYVRSHLADSSSSSSRVWRRRENLVLGTLVSLHSSQKEFGVCLSLIKEMLDGDFNNPSLLSKLGYIQLQYGDLEGAKSSFDQAEKLIKDKSSIENLNLVARNKALIYLVAKDYVSAVREYDECIERDGSDGVAINNKALCLMYLRDLSDSIKVLENSLERVPTVALNETLVVNLCSMYELAFVNHSDLKRTLSKWIARVAPDDFDSSCTRI*

Click here to download the sequence:
Link to NCBI Protein BLAST