Transcript Information: R_Transcript_12441.p1


Annotated TAIR IDAT1G64140.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3596 Blast hits to 2004 proteins in 150 species: Archae - 0; Bacteria - 54; Metazoa - 1597; Fungi - 38; Plants - 513; Viruses - 9; Other Eukaryotes - 1385 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:23804069-23806009 | Reverse length=646
E-Value1.4E-261
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 150.039692364719
Replicate 229.232590624177
Replicate 340.810071883784
Condition 2: 8 Hour
Replicate 126.414172290788
Replicate 232.395036842728
Replicate 338.973369014055
Condition 3: 24 Hour
Replicate 142.094998690917
Replicate 236.769688670472
Replicate 343.775409373795


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12441.p1 GENE.R_Transcript_12441~~R_Transcript_12441.p1 ORF type:complete len:673 (+),score=140.73 R_Transcript_12441:565-2583(+)
ATGGGCACTAGGGTTCCAGGTTTGGGCTTTCATTCTAACAATTTATCAAATGCATTCAAGGGTTTGGGAGAGTCGTTGCAAGTTCAAGGTTCTGGATCTGATTACTGTGCCGATACCATCCTACGGCTGCATCCCGTTGGATCTTTTGTCCCTCACTTCCCTCTGTCAAGAGGAGTGAAGCGTAAGTGGGGTTGGGGTGATGGAAACATGAGCCTGCATGTTGACTCTTCATTGTGTCTTGGACTGGGTCGTTCGTCTAGTTCATCAGACAGCAAAGGTAGCTCAGCAACTGGCTGTACTGCCATTTCTTCAGCCAAAGAAACTGAGGCAGAATCCTCAATGGATCTTGATTTAGACTTTTCTCTCCACCTTGGTAGTGATAAGACACCTAGCCCAAAGAAACCTGCAGTTTCAAGTTTTAAGGGAGTAGATCCACAGCAGAAGCTTGATTTGGAGCTCAGCCTTTCTACTGGGCCTTCTGAATCAGACATCACCAGCATCCATGAAGGTTTATATGCCGTTCAAAATCTAGAGCCTCCCTTGGCTGTTGAGGTAACAAATTTTGTGGATAATGAATCAGCATCATCTCACTGGCAAACAGAAATTTGTTTGTTTCCTGTGTTAGCAACTCCAGGAGCAGGAAGAAGTTTTCTTCCGAAGCAGATTCCTACGAAAGCTGATATTCCCTCTATCACTCCAGATATCTCGACAAGCATAGCAAGTGTTCCTAAAAGCTCAGTCACCTGTACTTCCGGAATTACTCAGCGGCCACAGCAGTCGCAACGTGGAAGCAGTTCAAAATTGTGTCAGTTTACTGGTTGTGGAAAGGGAGCACGAGGTGCTTCTGGCCTTTGCATTGCTCATGGTGGTGGGAGAAGGTGCCAAAGGCTGGGCTGCCACAAGGGTGCTGAAGGCAGAACTGCTTTCTGCAAGGCACATGGTGGTGGAAGACGATGTGAATTTCTTGGTTGCACAAAGAGCGCTGAAGGACGCACGGATTTCTGCATTGCCCATGGTGGTGGGCGCCGATGTGGTCAGGAAGGCTGCACTCGTGCTGCTCGAGGGAAATCTGGCTTGTGTATAAGGCATGGTGGTGGTAAGAGATGTCAAATGGAGAACTGCACTAGAAGTGCAGAAGGCTTGTCAGGACTGTGCATTTCCCATGGTGGAGGGCGTCGATGCCAATATCCAGCGTGCACAAAGGGAGCTCAAGGAAGCACTATGTTCTGCAAAGCACATGGTGGAGGAAAACGTTGCACTGTTGAAGGGTGTACCAAAGGTGCTGAGGGAAGCACACCCTTCTGCAAGGGCCATGGTGGAGGGAAAAGGTGTTCTTTCCAGGGATGCCCAAAGAGTGTTCATGGTGGGACTTCCTTCTGTGTAGCGCATGGAGGTGGCAAGAGGTGTGCTGTGAAAGGATGCACAAAAAGTGCTAGAGGAAGGACGGATTTTTGTGTCCGTCATGGTGGGGGCAAAAGATGTAGATTCGAGGGTTGTACCAAAAGTGCACAAGGAAGCACCGATTTCTGCAAGGCGCATGGAGGAGGGAAGAGATGTGCCTGGGGACAACCCGGGTCACATTATGGCAACCAAGCTGATGGCCCTTGTAGCTCCTTTACTCGGGGAAAAACAGGGTTTTGTGCAATGCATGGAGCCTTGGTTCAAGACAAGCGTGTTCATGGGGGTGTCACTTTGGGGCCTTTGTTGCAGGATCCAAAAACCATTGGGAGAAACATGGATGTTGTTCCTGAAGGAATGAATGTTGATGCCATTAAAACGGGATGCTCTAGTGTTAATGTTACGGGTTGGACTGCACACGATGTGCAACATGCTGAGCTCCAATGTTCACAGATATGGCCTCAATCACCTCCGTCTCCAGAAGGCAGAGTCCATGGTGGAAGTTTAATGGCATTGCTTTTTAATGGTTCAGGCCTCAAAGCAATCGATGGCATCAGTAGTCATGTCGGAAGCTCGTCCATGCCCGTGGAATATCCGGTATTGCAGCAAAATTGGTTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12441.p1 GENE.R_Transcript_12441~~R_Transcript_12441.p1 ORF type:complete len:673 (+),score=140.73 R_Transcript_12441:565-2583(+)
MGTRVPGLGFHSNNLSNAFKGLGESLQVQGSGSDYCADTILRLHPVGSFVPHFPLSRGVKRKWGWGDGNMSLHVDSSLCLGLGRSSSSSDSKGSSATGCTAISSAKETEAESSMDLDLDFSLHLGSDKTPSPKKPAVSSFKGVDPQQKLDLELSLSTGPSESDITSIHEGLYAVQNLEPPLAVEVTNFVDNESASSHWQTEICLFPVLATPGAGRSFLPKQIPTKADIPSITPDISTSIASVPKSSVTCTSGITQRPQQSQRGSSSKLCQFTGCGKGARGASGLCIAHGGGRRCQRLGCHKGAEGRTAFCKAHGGGRRCEFLGCTKSAEGRTDFCIAHGGGRRCGQEGCTRAARGKSGLCIRHGGGKRCQMENCTRSAEGLSGLCISHGGGRRCQYPACTKGAQGSTMFCKAHGGGKRCTVEGCTKGAEGSTPFCKGHGGGKRCSFQGCPKSVHGGTSFCVAHGGGKRCAVKGCTKSARGRTDFCVRHGGGKRCRFEGCTKSAQGSTDFCKAHGGGKRCAWGQPGSHYGNQADGPCSSFTRGKTGFCAMHGALVQDKRVHGGVTLGPLLQDPKTIGRNMDVVPEGMNVDAIKTGCSSVNVTGWTAHDVQHAELQCSQIWPQSPPSPEGRVHGGSLMALLFNGSGLKAIDGISSHVGSSSMPVEYPVLQQNWL*

Click here to download the sequence:
Link to NCBI Protein BLAST