Transcript Information: R_Transcript_124530.p1


Annotated TAIR IDAT1G74580.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28020777-28023068 | Forward length=763
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7415514477443
Replicate 21.2725030555332
Replicate 31.4788275918465
Condition 2: 8 Hour
Replicate 11.4839918149846
Replicate 22.3274172140364
Replicate 33.826426481241
Condition 3: 24 Hour
Replicate 12.9642491545652
Replicate 22.2665483444862
Replicate 33.4605066698652


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_124530.p1 GENE.R_Transcript_124530~~R_Transcript_124530.p1 ORF type:complete len:759 (+),score=129.54,PPR_2|PF13041.2|97,PPR_2|PF13041.2|32,PPR_2|PF13041.2|0.00025,PPR_2|PF13041.2|6.9e-15,PPR_2|PF13041.2|4.7e-09,PPR_2|PF13041.2|7.3e-08,PPR_2|PF13041.2|2.6e-09,PPR_2|PF13041.2|3.1e-14,PPR_2|PF13041.2|2.9e-13,PPR_2|PF13041.2|3.2e-16,PPR_2|PF13041.2|1.2e-05,PPR_2|PF13041.2|6.4e-17,PPR_2|PF13041.2|3e-15,PPR_2|PF13041.2|2.7e-15,PPR_2|PF13041.2|1.7e-16,PPR_2|PF13041.2|1.8e-16,PPR_2|PF13041.2|2.9e-11,PPR_2|PF13041.2|3.4e-16,PPR_2|PF13041.2|0.19,PPR_1|PF12854.3|2.1e+02,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|12,PPR_1|PF12854.3|3.3e-08,PPR_1|PF12854.3|0.28,PPR_1|PF12854.3|0.029,PPR_1|PF12854.3|4.9e-07,PPR_1|PF12854.3|9.3e-11,PPR_1|PF12854.3|4.7e-10,PPR_1|PF12854.3|6.7e-12,PPR_1|PF12854.3|2.4e-05,PPR_1|PF12854.3|5.3e-10,PPR_1|PF12854.3|1e-11,PPR_1|PF12854.3|5.8e-05,PPR_1|PF12854.3|8.2e-15,PPR_1|PF12854.3|1.4e-10,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|5.5e-06,PPR_1|PF12854.3|2.2e+02,PPR|PF01535.16|7.7e+03,PPR|PF01535.16|0.37,PPR|PF01535.16|0.022,PPR|PF01535.16|0.039,PPR|PF01535.16|0.00034,PPR|PF01535.16|0.0089,PPR|PF01535.16|0.62,PPR|PF01535.16|0.036,PPR|PF01535.16|8.6e-07,PPR|PF01535.16|2.9e-06,PPR|PF01535.16|5.7e-07,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|5.1e-05,PPR|PF01535.16|6.3e-06,PPR|PF01535.16|0.00041,PPR|PF01535.16|1.7e-08,PPR|PF01535.16|4.4e-05,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|0.0015,PPR|PF01535.16|0.78,PPR_3|PF13812.2|0.53,PPR_3|PF13812.2|30,PPR_3|PF13812.2|0.39,PPR_3|PF13812.2|3.6e-05,PPR_3|PF13812.2|6.5e+03,PPR_3|PF13812.2|6.1e+02,PPR_3|PF13812.2|3.1,PPR_3|PF13812.2|0.0055,PPR_3|PF13812.2|0.00066,PPR_3|PF13812.2|0.0087,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|9.1,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|3.2e-05,PPR_3|PF13812.2|4.9e-06,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|0.00023,PPR_3|PF13812.2|13,PPR_3|PF13812.2|4.5e+02,MRP-S27|PF10037.5|22,MRP-S27|PF10037.5|0.0025,MRP-S27|PF10037.5|0.38,MRP-S27|PF10037.5|0.12,MRP-S27|PF10037.5|1.4,MRP-S27|PF10037.5|7.7,MRP-S27|PF10037.5|3.6e+02 R_Transcript_124530:1020-3296(+)
ATGAATAGGCCTTTACTAGCTAAACATGTAGCTGCTGTGATAAAACATCAGAAAGACCCTCTAAAGGCGCTCGAAACGTTCAAATCCGTTAAGAATGAAGAGGGTTTTAAGCACAATTTGCTGACCTATAGGTGCATAGTAGATAAGCTTGGTTATCATGGGAAATTTGAAGCGATGGAGTCTTTGCTTTCCGAGATGAGGAAGGATATCGACAATGGTGTGGTGGAGGGAGTGTACATCGGAGCCATGAAAAATTACGGGAGGAAAGGGAAGGTTCAAGAGGCGGTGGATGTATTTGAGAGGATGGATTTCTATAACTGTGAACCGTCTGTCATGTCTTATAACGCCATCATGAACATTCTTGTCGAACATGGGTATTTTGATCAAGTGCACAAAGTTTATATGAGGTTGCAAGATAAAGGGATTAGTCCTGATGTATATACTTATACAATCAGGATCAAGTTGTTTTGTAAGACTGGGAGATTTAATGCTGCTCTGAGGCTTCTTAAGAACATGGCTTCACAAGGGTGTGATGTCAATGCAGTTGCCTATTGTACTCTCATAGGGGGGCTTTATGAAGAGAATTATGGTGTTGAAGCATCCAAGTTATTTTGTCAGATGCTCAGCCTTGGCATTTGTCCTGAGACGTCTACGTTTAACAAGCTAGTACATGTGCTTTGCAGGCAAAGGGATGTCCGAGAAAGTCAGAGACTTTTGGGCAAGGTGTTCAAAAGGGGATTTTCACCAAATTTGTTTACATTCAATATTTTCATTGAAGGACTTTGTGAGAATAATTCAGTAGATGATGGTGCTAATTTGCTCAATAGCATTAGACGGGAGGGCTTTTCTCCAGATGTTGTGACATACAACATACTCATACGTGGATTGTGTAAGAACTCCAATATTCTTGAAGCTGAGCATTACATGCATCAAATGATAAATAGTGGGTTTAGTCCGGATGCTTTCACATACAATTCTATCATTGATGCATACTGCAAATCAGGTATGGTACAAAAGGCAGATAATGTGCTTCGTGATGCAGTTTTTAGAGGCTTTGTGCCTGATGAATTCACATATTGCTCCTTGATCAATGGCTTATGCAAGGAGGGTGATGTAGAGAGAGCCATGGCAATATTTAATGAGGCTGAGACTAAAGGATGGAAGTCTAATATTATCCTCTATAATACGTTGATCAAAGGGTTATCCCAGCAGGGGCTGATTCTGGAGGCTGTACAACTTATTAACGATATGCTGAGAACTGGTTGCTTGCCTGACATATGGACTTACAATACAGTTATCAATGGATTGTGTAAAATGGGCTGCCTATCTGATGCCAATAACCTGGTAGATGATGCTATAACAAGAGGATGTTTGCCTGATGTTTTCACCTTTGATACACTAATTGATGGATACTGCAAGCAGATGAAGTTGGAAACTGCAATTGAAATTATTGATAAAATGTGGGAGCATGGTGTTACCCCTGACGTGATTACATACAACACTCTGTTGGATGGCCTTAGCAAGGCCGCTAAGTTTGAAGCTGTGATGGGGACTTTTGCAACAATGGTTGAGAAAGGGTGTGAGCCAAACCTTATTACCTACAATGTACTCATAGACAGTCTCTGCAAAGCTAATAAGATAAAAGATGCTTTAGACTTGCTGGAGGAGATGAGGTACAAGGGTCTTATTCCAGATCTTGTTACGTTTGGCACATTGATCAGTGGTTATTGCAGGATTGGAGATTTGAATGGAGCCTACCAGCTGTTCAGGAAGATTGACCAACAATATGGACATTCACATACAACAGCAACATATAACATTATGATCAATGCATTTTCGGAAAAGCTAAGATTAGATGTGGCTCAGAAGCTTTTTCATGAAATGGCTGAGAATGGCTCCCCTCCTGACAGCTATACTTACCGTGTCTTAATAGATGGATTTTGTAAAGCAGGGAATGGTGATGCTGGCTACAAGTGTCTCTTGGAGAAGATTGAGAAGGGATTTGTGCCCTCATTGACAGCATGTGGAAGAGTACTCAATTGTCTTTGTGTGAAACACAGGGTCAGGGAAGCTGTTGGCATAATCCAACTTATGGCGCGTAAAGGTATCGTTCCAGAAGTCGTTGAGAATATTTTCAGCTCTACTAAAAGGGAGATTGCAGCACCAAAGATCATTGTGGAAGACTTGTTGAAGAAGAGCTACATAACTTATTATGCATATGAGCTTCTATATGATGGTGTTCGAGATATAAAGTCACCGAAGGAAGGTCTTTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_124530.p1 GENE.R_Transcript_124530~~R_Transcript_124530.p1 ORF type:complete len:759 (+),score=129.54,PPR_2|PF13041.2|97,PPR_2|PF13041.2|32,PPR_2|PF13041.2|0.00025,PPR_2|PF13041.2|6.9e-15,PPR_2|PF13041.2|4.7e-09,PPR_2|PF13041.2|7.3e-08,PPR_2|PF13041.2|2.6e-09,PPR_2|PF13041.2|3.1e-14,PPR_2|PF13041.2|2.9e-13,PPR_2|PF13041.2|3.2e-16,PPR_2|PF13041.2|1.2e-05,PPR_2|PF13041.2|6.4e-17,PPR_2|PF13041.2|3e-15,PPR_2|PF13041.2|2.7e-15,PPR_2|PF13041.2|1.7e-16,PPR_2|PF13041.2|1.8e-16,PPR_2|PF13041.2|2.9e-11,PPR_2|PF13041.2|3.4e-16,PPR_2|PF13041.2|0.19,PPR_1|PF12854.3|2.1e+02,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|12,PPR_1|PF12854.3|3.3e-08,PPR_1|PF12854.3|0.28,PPR_1|PF12854.3|0.029,PPR_1|PF12854.3|4.9e-07,PPR_1|PF12854.3|9.3e-11,PPR_1|PF12854.3|4.7e-10,PPR_1|PF12854.3|6.7e-12,PPR_1|PF12854.3|2.4e-05,PPR_1|PF12854.3|5.3e-10,PPR_1|PF12854.3|1e-11,PPR_1|PF12854.3|5.8e-05,PPR_1|PF12854.3|8.2e-15,PPR_1|PF12854.3|1.4e-10,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|5.5e-06,PPR_1|PF12854.3|2.2e+02,PPR|PF01535.16|7.7e+03,PPR|PF01535.16|0.37,PPR|PF01535.16|0.022,PPR|PF01535.16|0.039,PPR|PF01535.16|0.00034,PPR|PF01535.16|0.0089,PPR|PF01535.16|0.62,PPR|PF01535.16|0.036,PPR|PF01535.16|8.6e-07,PPR|PF01535.16|2.9e-06,PPR|PF01535.16|5.7e-07,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|5.1e-05,PPR|PF01535.16|6.3e-06,PPR|PF01535.16|0.00041,PPR|PF01535.16|1.7e-08,PPR|PF01535.16|4.4e-05,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|0.0015,PPR|PF01535.16|0.78,PPR_3|PF13812.2|0.53,PPR_3|PF13812.2|30,PPR_3|PF13812.2|0.39,PPR_3|PF13812.2|3.6e-05,PPR_3|PF13812.2|6.5e+03,PPR_3|PF13812.2|6.1e+02,PPR_3|PF13812.2|3.1,PPR_3|PF13812.2|0.0055,PPR_3|PF13812.2|0.00066,PPR_3|PF13812.2|0.0087,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|9.1,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|3.2e-05,PPR_3|PF13812.2|4.9e-06,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|0.00023,PPR_3|PF13812.2|13,PPR_3|PF13812.2|4.5e+02,MRP-S27|PF10037.5|22,MRP-S27|PF10037.5|0.0025,MRP-S27|PF10037.5|0.38,MRP-S27|PF10037.5|0.12,MRP-S27|PF10037.5|1.4,MRP-S27|PF10037.5|7.7,MRP-S27|PF10037.5|3.6e+02 R_Transcript_124530:1020-3296(+)
MNRPLLAKHVAAVIKHQKDPLKALETFKSVKNEEGFKHNLLTYRCIVDKLGYHGKFEAMESLLSEMRKDIDNGVVEGVYIGAMKNYGRKGKVQEAVDVFERMDFYNCEPSVMSYNAIMNILVEHGYFDQVHKVYMRLQDKGISPDVYTYTIRIKLFCKTGRFNAALRLLKNMASQGCDVNAVAYCTLIGGLYEENYGVEASKLFCQMLSLGICPETSTFNKLVHVLCRQRDVRESQRLLGKVFKRGFSPNLFTFNIFIEGLCENNSVDDGANLLNSIRREGFSPDVVTYNILIRGLCKNSNILEAEHYMHQMINSGFSPDAFTYNSIIDAYCKSGMVQKADNVLRDAVFRGFVPDEFTYCSLINGLCKEGDVERAMAIFNEAETKGWKSNIILYNTLIKGLSQQGLILEAVQLINDMLRTGCLPDIWTYNTVINGLCKMGCLSDANNLVDDAITRGCLPDVFTFDTLIDGYCKQMKLETAIEIIDKMWEHGVTPDVITYNTLLDGLSKAAKFEAVMGTFATMVEKGCEPNLITYNVLIDSLCKANKIKDALDLLEEMRYKGLIPDLVTFGTLISGYCRIGDLNGAYQLFRKIDQQYGHSHTTATYNIMINAFSEKLRLDVAQKLFHEMAENGSPPDSYTYRVLIDGFCKAGNGDAGYKCLLEKIEKGFVPSLTACGRVLNCLCVKHRVREAVGIIQLMARKGIVPEVVENIFSSTKREIAAPKIIVEDLLKKSYITYYAYELLYDGVRDIKSPKEGLS*

Click here to download the sequence:
Link to NCBI Protein BLAST