Transcript Information: R_Transcript_124606.p1


Annotated TAIR IDAT5G05330.1
Annotated Gene NameHMG-box (high mobility group) DNA-binding family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1577289-1578750 | Reverse length=220
E-Value3E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5690147118165
Replicate 22.1113598183987
Replicate 32.6873826230123
Condition 2: 8 Hour
Replicate 11.6415104992567
Replicate 21.8738169140658
Replicate 32.9407637317945
Condition 3: 24 Hour
Replicate 13.4629094701006
Replicate 22.5874884731962
Replicate 33.0569419953767


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_124606.p1 GENE.R_Transcript_124606~~R_Transcript_124606.p1 ORF type:complete len:179 (+),score=40.88 R_Transcript_124606:165-701(+)
ATGGCGAACCCCCCACGAAATCGCAAAAGGGTTCGCGCTCTTCGCCGTGCCCCTGATGGCAGCGCCTTCCAGAAGTGTGATGAATGTGGAGCTTCTGTGGCAGTAGCTTTGATGGACATGCATGACTGCCAATTGAAGAAGAATGTCAAGAAACTCAAACCCAAATGTGGGGGCCCAGTTGACAATAACAACACCATTTCTGAAGAGCCCAGATCAACTTTTCAATACTTCTTGGAAAGCTATATGGAGACTTGCAAGGGTGGAGATGTGCTTGAGAATGATCGAAAAGCGTTTGAGAAATGGAAGACCATGTCACATGAGGAGCGTTGGCCGTATGTTTACAAAGCTCTTAAGGCCGAAAAGGCTTATGTGAAAGTATTGCATCAAGAGGTTGAAAAAATGTCTCAAGAAGACGATGATGAGGCAGATTCAGCAATGGTTGGCAAGTTTACTCAGGACTATGAAGACTCAGAGAACTCTGGCAATTTTTTTGCAGATAGTGACGGAAGATGTGCCTGCGAATTCTGTTGTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_124606.p1 GENE.R_Transcript_124606~~R_Transcript_124606.p1 ORF type:complete len:179 (+),score=40.88 R_Transcript_124606:165-701(+)
MANPPRNRKRVRALRRAPDGSAFQKCDECGASVAVALMDMHDCQLKKNVKKLKPKCGGPVDNNNTISEEPRSTFQYFLESYMETCKGGDVLENDRKAFEKWKTMSHEERWPYVYKALKAEKAYVKVLHQEVEKMSQEDDDEADSAMVGKFTQDYEDSENSGNFFADSDGRCACEFCCA*

Click here to download the sequence:
Link to NCBI Protein BLAST