Transcript Information: R_Transcript_124985.p1


Annotated TAIR IDAT5G09580.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53345.1); Has 53 Blast hits to 53 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2972639-2974438 | Forward length=393
E-Value8.3E-146
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5872139960625
Replicate 21.7116549252417
Replicate 31.4939176693143
Condition 2: 8 Hour
Replicate 11.9961302946124
Replicate 22.2482408372931
Replicate 33.0088267604446
Condition 3: 24 Hour
Replicate 11.9963310632786
Replicate 21.8579158304562
Replicate 32.7954405442505


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_124985.p1 GENE.R_Transcript_124985~~R_Transcript_124985.p1 ORF type:complete len:368 (+),score=53.80 R_Transcript_124985:71-1174(+)
ATGGCGATCTTTATTCTCCGTCGCTTTCTCCGTCAGTCGCCAGCGCCGTCGCTGATGTTTCTCCGGTGTCTCCGGTCAGACACGGCGTTAGAGGCGATCGCAAGAGCCGCCGAGGATCGAACTCCGGTGGTAGCTCTCTACAACTTTCCCTCATTTTCCGGCGCTTTTTCAGCTCTCTTCACTCACCTCTTCCACTCTCACCTACGCACCACTTGCCTCATCCTGCCTTTTTCCTCCGTCATACCTCTCAGGGTTGATGATTTGTGTTTGGACGGGTTGAAGGCGTGTTACTTTCTTGATTTTATTGGTCCAACAGGATTTTCTGTGGAGCTTTCTCGCAGAACAGATTGCGAGGTAATATGTTTTGATCACCGGAAAAAGACACTCTCTAAGCTGCCTTCTACATCAGATTGTGCCCGGAAGCTCGCAGTTCATGTGGATATTGAGAGGAGCAGCTCTAGGGCTGTATATGAGTACTTTTCAAGCAAGCTCAAGGAAGTGAAACCTAATGATGGAAATAGTGTGATTAGTAGTTTACTGAGCCCAAAGGATCAAGATCATGTGGAGCTACTTTTGAAGTACCTTGAAGACAGCGATCTACAACAGTGGAAGCTGCCAGACATCCGGGCATTTAACATTGGGATTTCTGAATGGAGGTCAAAGCTGAATTGCATCACCAATCCGCACATGTTTGAGCAGTTGCTGGAGATGAGTGCAGAGGAACTGATACGCCAGGGAAATTCCTATATCTCAACTAGAAAGGATGCTGCTAAAGAGTTTCTGGAAAAAGCTTTTATCCTTCGGCTAGGTCGAGGTCTTTATGGGGAGTGCCTGGGAGTTAGAGCTGATAGCAATCCTGATCTTAGTGATGAAATTGGCAAAGAGCTTAGTTTGAGGAGTGCAAAAGCTGGCTTAAGGCCTATTGGAGCTGTTATTTTCATGCAACGGAATAACCTGAAAATGTGTCTGAGGAGTACTGATGGCTCTACAGACACCTCTGAAGTTGCAAAGGCATATGGTGGTGGAGGTTCTCCAAGTTCTAGCTCCTTCATCATTAGGATGGATGAATATAACCACTGGCTTTCAGTCAACTCATCATATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_124985.p1 GENE.R_Transcript_124985~~R_Transcript_124985.p1 ORF type:complete len:368 (+),score=53.80 R_Transcript_124985:71-1174(+)
MAIFILRRFLRQSPAPSLMFLRCLRSDTALEAIARAAEDRTPVVALYNFPSFSGAFSALFTHLFHSHLRTTCLILPFSSVIPLRVDDLCLDGLKACYFLDFIGPTGFSVELSRRTDCEVICFDHRKKTLSKLPSTSDCARKLAVHVDIERSSSRAVYEYFSSKLKEVKPNDGNSVISSLLSPKDQDHVELLLKYLEDSDLQQWKLPDIRAFNIGISEWRSKLNCITNPHMFEQLLEMSAEELIRQGNSYISTRKDAAKEFLEKAFILRLGRGLYGECLGVRADSNPDLSDEIGKELSLRSAKAGLRPIGAVIFMQRNNLKMCLRSTDGSTDTSEVAKAYGGGGSPSSSSFIIRMDEYNHWLSVNSSY*

Click here to download the sequence:
Link to NCBI Protein BLAST