Transcript Information: R_Transcript_12499.p1


Annotated TAIR IDAT1G48540.1
Annotated Gene NameOuter arm dynein light chain 1 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:17945540-17950405 | Forward length=1063
E-Value1.7E-259
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0930882140884
Replicate 22.3753390369953
Replicate 33.5632702927348
Condition 2: 8 Hour
Replicate 12.8690508423035
Replicate 23.5687063948559
Replicate 34.9137693396603
Condition 3: 24 Hour
Replicate 14.1277673601327
Replicate 22.5619745175923
Replicate 33.5374068180844


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12499.p1 GENE.R_Transcript_12499~~R_Transcript_12499.p1 ORF type:complete len:990 (+),score=197.01,LRR_4|PF12799.3|9.2e+02,LRR_4|PF12799.3|9.5e+02,LRR_4|PF12799.3|6.2e+03,LRR_4|PF12799.3|0.0001,LRR_4|PF12799.3|3,LRR_4|PF12799.3|0.42,LRR_8|PF13855.2|1.1e+04,LRR_8|PF13855.2|0.018,LRR_8|PF13855.2|0.0011 R_Transcript_12499:363-3332(+)
ATGGAGATTGTGACAGGAGATCGATACCTTGAATCGCTAGTGAAATTTGTTGAGAAAAACGCGGGAAGTTTGATTGAAGGGACACTGGTGTTGAAGCTGAACCCGGTGGGGCTTCACTATGTGCAATCTAGGCTCGAAGCGCTACACGAGCTTGAGAGGCTCATTGCTGGAGCTCCAGTTGATTATCTCAGAGCTTACGTTTCCGATCTCGGCGATCACAGGGCCCTCGAACAGGTTCGGAGGATTCTGTGCCGATTGACATCGTTGAAGGTTGTGTCGGTGTTGCCACCGCCTTTGAGAGATCCTACGCCATTATCGCTGCTCGCCTTTGGGAGGTTGAAGGTGTTGGAGCTCCGTGGTTGTGATCTTTCCTCTTCTGCTGCTAAGGGGCTGCTTGAATTGAGACATACTTTGGAGAAATTTATTTGTCACAATTCCACTGATGCACTTCGTCATGTTTTTGCTAGTAGAATCGCTGACATAAAGGAATCGCCCCATTGGAACCGATTGTCATTTGTATCTTGTGCACGTAATGGTTTGATTCTCATGGATGAGTCATTACGACTCCTTCCTGTTGTTGAAACCCTTGATCTTAGCCGCAACAAATTTGCTAAACTAGATAATCTGCGCAAATGCACAAGACTAAAGCACTTGGATCTTGGATTCAATCAACTCAGATCAATTGCGTCATTGAGTGAGCTCACATGTCATTTATCAAAACTTGTTTTGAGGAGCAATGCATTGAGGACATTGCGAGGGATTGATAGTCTGAAATCAATTGAAGGACTTGACATCTCATACAACATCATTTCTAACTATTTGGAGTTACAAGTCCTTTCAAGTATTCCATGTTTAAAGAATCTTTGGCTCGAAGGGAATCCCTTGTGCTGTGCTCGATGGTATCGGCCACAAGTTTTCAGCTTTTTTGCTCATCCTGAACAAGTGGAATTGGATGATAGAGAAATGAGCACAAGAGAGTCTTGGAAGAGGCGGATAATCATTGCTAGGAGGCAGAGAAGGCCTGCAAGCTTTGGATTTTATTCTCCTGCTAGGGAAGGTAACGAAGAGGACGGGCTTGTAAATGGCAAAAGGAAGAAACTGTCTCGCTTAGCATGTATCGAAGGTGAAGATCCTGGAATGAACGTGTTTTTCGAGCATGATTTGCTATCATGTGATATGGAAATTCAAGATGAACGTGAGAATATTGTTTCTGATAGTGAAGGCGAAATCACTAGCTTGATAAACAGAATTGAGTTAATGAAAAAAGAGCGTTCTAGGTTATGGTTAGAGGACTTCAAAGATTGGATGGATCAGGGATCAGAGAATTTGATGGGTGAAAGTAAGAATGGCCAAGCAATTCTGGCTTTAGGTAAAGGAAAGTTTGCTGATAAGAATTGGGGAAATGTTGGAGAGACTTCAAGATACTCAGGATATGTATCAGACTCAATCTTAGGTTCCGGAGATGATAGGAGCACAAATGCTCTAGAATCGAATTGCTCAGTTGCTGGTAACCATGGTAATCAATGGCTTGATTCTGTTAATGAAAATGGCCAAATCAAGCCTGGAACAGTTGACATGGCTTCGGAAGAGGGTAGTATGAAATTTTATCTGCATAAAGGAGAAAACTATCCCGCAATGAATGATTATAATTCCAGGACTGCTAACATTAATATAAAAGGAGTTGATATCAAGAATTTGGGTGTCTCTGTTTTGCCATCTACTGCCATAGATGATATTGTGATGTCAAAGTCATCCTCTGTGCAACATGGATCACCTCCTCACTATCAGGAGGATATTCTTCATCGCCGTGATCACTTAGAAGAAGAATTTTTGCAGCTGTCTGCAGAATCCATTTCTGTTGCATCATCTGATAGTGATACCAGCAGTGATGAAGATGCTGGACATGAAACTGTGCCACCTTCTGCCAAAATTGAGCATTTTGTTAATATAGAACCTTTGGGAAGCAAAATCAATTCTCAATTCTTGCTTCCCTCCACAGGAAAGGGTGACAATGGACACTATTTTGTTAATGTAGGACATGTAGGGTCTTCACTAGATTTATATGCTCAACAGGCCACTAATGAGCTCAATGGAAAAAAGCATTCTGTAGAGATGTTCTGTGATATACCTCCTTCAGGAGACAATGAAGAAGATGTTGATACTTCAAGCAAACAAGATGTGGATTTCCATAAGGAGAAAAGATCCAAAAGGAAGCCCAGAAAAAGAGTTGTTTCTCTGTCTGACGATAACAGCACGTGTTCCTGTGGCAATGATGTCAAAGATGAGCACAAAGAGGACACCATGAATGACACCAATTGCATCGAGAGATCGTGGAAGAAGTTGAGCCAGCCATCTCATGATGAGGCTGGTGTATTACCTCAGGCAAAACATTCAGTTGCAAAGGCTGGTGACCACATAGAAAATTACTTCAATGCGTGTGTGGCAGACTCTTCTGTTCATGAGACTTGCAAACAGTATGTGGTGTGCGATTGTGTACTTGAGAGAGGAACTGATTTGAGAGAAAGACAGGTGGCTGTGATTCTGAGCAATAGATGGAAGCTGCATGTACTTCTTGACAGCAGCATGCTTGATGGGTCAGGAAACAGCATGAGTGTGTTAAGTTCCCACGAAGTTGCAGATGTGAGTGAAGTTTTGGTTGGTTTGGGACTACAGGTTGTCAGGGTATATATTGATGAGAGTACACCATACCTGCTGATTACAAAAAGCGTGGAGAAAACAAGGCATTTACTTTGCATGTTGGGGCTTTCGTCACATGGTGTATCAAAGAGATGTAGTCTTAGGAGTTTAGAACATGTTCAAGTTAACTTGTTTGATAGACATATACATGGAGGCTTGGGAATAAACATCTACCAGTATTGTATGGTGCTGTTTTGGCGCAACAATAATCGAGGTATCTCTCTATTGAATACAAACACACATTCACATGCATTTGCACCCACCATCCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12499.p1 GENE.R_Transcript_12499~~R_Transcript_12499.p1 ORF type:complete len:990 (+),score=197.01,LRR_4|PF12799.3|9.2e+02,LRR_4|PF12799.3|9.5e+02,LRR_4|PF12799.3|6.2e+03,LRR_4|PF12799.3|0.0001,LRR_4|PF12799.3|3,LRR_4|PF12799.3|0.42,LRR_8|PF13855.2|1.1e+04,LRR_8|PF13855.2|0.018,LRR_8|PF13855.2|0.0011 R_Transcript_12499:363-3332(+)
MEIVTGDRYLESLVKFVEKNAGSLIEGTLVLKLNPVGLHYVQSRLEALHELERLIAGAPVDYLRAYVSDLGDHRALEQVRRILCRLTSLKVVSVLPPPLRDPTPLSLLAFGRLKVLELRGCDLSSSAAKGLLELRHTLEKFICHNSTDALRHVFASRIADIKESPHWNRLSFVSCARNGLILMDESLRLLPVVETLDLSRNKFAKLDNLRKCTRLKHLDLGFNQLRSIASLSELTCHLSKLVLRSNALRTLRGIDSLKSIEGLDISYNIISNYLELQVLSSIPCLKNLWLEGNPLCCARWYRPQVFSFFAHPEQVELDDREMSTRESWKRRIIIARRQRRPASFGFYSPAREGNEEDGLVNGKRKKLSRLACIEGEDPGMNVFFEHDLLSCDMEIQDERENIVSDSEGEITSLINRIELMKKERSRLWLEDFKDWMDQGSENLMGESKNGQAILALGKGKFADKNWGNVGETSRYSGYVSDSILGSGDDRSTNALESNCSVAGNHGNQWLDSVNENGQIKPGTVDMASEEGSMKFYLHKGENYPAMNDYNSRTANINIKGVDIKNLGVSVLPSTAIDDIVMSKSSSVQHGSPPHYQEDILHRRDHLEEEFLQLSAESISVASSDSDTSSDEDAGHETVPPSAKIEHFVNIEPLGSKINSQFLLPSTGKGDNGHYFVNVGHVGSSLDLYAQQATNELNGKKHSVEMFCDIPPSGDNEEDVDTSSKQDVDFHKEKRSKRKPRKRVVSLSDDNSTCSCGNDVKDEHKEDTMNDTNCIERSWKKLSQPSHDEAGVLPQAKHSVAKAGDHIENYFNACVADSSVHETCKQYVVCDCVLERGTDLRERQVAVILSNRWKLHVLLDSSMLDGSGNSMSVLSSHEVADVSEVLVGLGLQVVRVYIDESTPYLLITKSVEKTRHLLCMLGLSSHGVSKRCSLRSLEHVQVNLFDRHIHGGLGINIYQYCMVLFWRNNNRGISLLNTNTHSHAFAPTIH*

Click here to download the sequence:
Link to NCBI Protein BLAST