Transcript Information: R_Transcript_125002.p1


Annotated TAIR IDAT5G57560.1
Annotated Gene NameXyloglucan endotransglucosylase/hydrolase family protein
Annotated Gene Symbol(s)TCH4, XTH22
Annotation TypeOrtholog
Chromosome Positionchr5:23307296-23308235 | Reverse length=284
E-Value1.9E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7433885762693
Replicate 24.7060673346875
Replicate 34.0481734544925
Condition 2: 8 Hour
Replicate 10.633255127946
Replicate 20.38553244553768
Replicate 30.23471910284983
Condition 3: 24 Hour
Replicate 11.8801652470965
Replicate 23.1371704456425
Replicate 32.1699017577528


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_125002.p1 GENE.R_Transcript_125002~~R_Transcript_125002.p1 ORF type:3prime_partial len:232 (+),score=21.57,Glyco_hydro_16|PF00722.17|2.5e-43 R_Transcript_125002:305-997(+)
ATGCATTATTCGAACCGGTCATCAGCTCCATCAATACCATCACTATGTTCACTTCAAACCTTCATAGGCTTGGCTGTGATCCTGTGCATATACTTCACTTTCGAGACATCGATCTCGTTACACGAGAAACCACTTTCAACACAGCATATTAGAACCGTGGCCTTTCCTTCCTCTGTGATCCCGTCCTCAAGATTCGAGTTAGAAGAAACTCCATCAATTGATCATTCATACATTCCACCAGAGAAAGAAATCCTTTCTAATCCACCAGAGGAAGTCGTCATCCTAGGAGGCTTAGCCAAGGACTTTGAAATAACATGGGGAGATGATAGAGGCAAGTTTCACGAAAATGGAGATCTCCTTACTTTGTCCTTAGACAAATTCTCAGGGTCAGGGTTCCAATCCAAAGATGAGTATTTATTTGCAAAGATTAGTATACAAATGAAGCTCATTCCTGACAACTCTGCTGGTACTGTCACCACTTTCTACTTGTCCTCGAATGGATCGTTCCACGATGAGATAGATTTCGAGTTCCTAGGAAATGTGAGTGGCCAACCTTACACTCTACACACCAATGTGTATAGCCAAGGGAAAGGTAACCGCGAGCAGCAATTCTACTTGTGGTTCGACCCAACTGAAGATTTTCATAGCTACTCAATTTTATGGACTCCTTTAAGAATTGTGTTCTTTGTGGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_125002.p1 GENE.R_Transcript_125002~~R_Transcript_125002.p1 ORF type:3prime_partial len:232 (+),score=21.57,Glyco_hydro_16|PF00722.17|2.5e-43 R_Transcript_125002:305-997(+)
MHYSNRSSAPSIPSLCSLQTFIGLAVILCIYFTFETSISLHEKPLSTQHIRTVAFPSSVIPSSRFELEETPSIDHSYIPPEKEILSNPPEEVVILGGLAKDFEITWGDDRGKFHENGDLLTLSLDKFSGSGFQSKDEYLFAKISIQMKLIPDNSAGTVTTFYLSSNGSFHDEIDFEFLGNVSGQPYTLHTNVYSQGKGNREQQFYLWFDPTEDFHSYSILWTPLRIVFFVD

Click here to download the sequence:
Link to NCBI Protein BLAST