Transcript Information: R_Transcript_125040.p1


Annotated TAIR IDAT1G09800.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3177121-3180336 | Reverse length=372
E-Value2.3E-156
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5007300984238
Replicate 24.1992600832596
Replicate 33.2006674449419
Condition 2: 8 Hour
Replicate 14.4275810589539
Replicate 23.9208121584545
Replicate 35.122235325753
Condition 3: 24 Hour
Replicate 16.5414026073458
Replicate 26.2842381496439
Replicate 37.1959577052813


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_125040.p1 GENE.R_Transcript_125040~~R_Transcript_125040.p1 ORF type:complete len:365 (+),score=74.75,PseudoU_synth_1|PF01416.16|8.2e-17,PseudoU_synth_1|PF01416.16|4.7e-13 R_Transcript_125040:166-1260(+)
ATGAGTTCTAAGCCCGGTTCCACTTCCCCACAACACTCAACGACGTCGTGTAACACCAGTTCCCAGTCGAAGCACTGCCTTGAGCAACGCTCAGAATCACCAGAGCAACGGCCTCTTAAGCTTGCAAAGATCGAAGAACAACAGCAGGAAGTAGAAGAAGGAGAGAGAGTAGAAAAGAACATGAACCCAAGACCTGGAATGCAGAGATACTTAGTTGCACTTGAGTATATTGGCACTAAATTCTCTGGGTCTCAGCAACAGCCTAATCAAAGAACTGTTATGGGTGTTCTCCAGGAAGCTTTTCACAAATTTGTTGGGCAACCAGTTTCAGTCTTTTGCTCGAGTCGAACTGATGCAGGAGTTCATGCCTTATCAAATGTTTGCCATGTGGATGTGGAACGGATTAGTAAGAGGAAACCAGGTGAAGTGTTGCCACCTCATGAGCCTTCAGTAGTTACAAGAGCTATAAACCATTTTTTACAGAAAGAGGGTGACATAATGGTCATTGATGTTCGAAGTGTTCCCTCTGATTTTCATGCCAGATACAAGGCCCTAGAGCGCACGTATTATTACCGCTTGTTTTCTGGTCCTGAGGCATTGTCAACATTTGAGAGAGACCGGGCATGGCATGTTCCTGAGGAGCTAAACATTCAAGCCATGCAGGAAGCATGCAAAGTTCTCATTGGACAGCATGATTTCAGTTCATTTAGGGCGGCTGGTTGTCAGGCCAACTCCCCTATCAGGACTTTAGATGAGCTTCATGTTTCTGAGACTACTTCCACTCCACATATGCCATCCTTTACTAATGGGATGATTAATGAGCTCACTGATATCGGAAAAGAGACATCCAATGGATCTTGTCAGAAGTTTGGCTTTAGGAAAGGACACCGTTGCTTGGTAGTGAAAGCACGTGCACGCTCTTTTCTCTATCATCAGGTGAGGTTGCTTGTTGGCGTCCTGAAGTGTGTTGGCACAGGACACTTGACAGTTTCTGATGTGGAAAGAATCCTAAATGCTAGAGATGTGACAGCTGCTAGTCCTATGGCACCAGCCTGTGGTTTGTACCTTGGACTTGTGAAGTATGATTTGGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_125040.p1 GENE.R_Transcript_125040~~R_Transcript_125040.p1 ORF type:complete len:365 (+),score=74.75,PseudoU_synth_1|PF01416.16|8.2e-17,PseudoU_synth_1|PF01416.16|4.7e-13 R_Transcript_125040:166-1260(+)
MSSKPGSTSPQHSTTSCNTSSQSKHCLEQRSESPEQRPLKLAKIEEQQQEVEEGERVEKNMNPRPGMQRYLVALEYIGTKFSGSQQQPNQRTVMGVLQEAFHKFVGQPVSVFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVTRAINHFLQKEGDIMVIDVRSVPSDFHARYKALERTYYYRLFSGPEALSTFERDRAWHVPEELNIQAMQEACKVLIGQHDFSSFRAAGCQANSPIRTLDELHVSETTSTPHMPSFTNGMINELTDIGKETSNGSCQKFGFRKGHRCLVVKARARSFLYHQVRLLVGVLKCVGTGHLTVSDVERILNARDVTAASPMAPACGLYLGLVKYDLD*

Click here to download the sequence:
Link to NCBI Protein BLAST