Transcript Information: R_Transcript_125046.p1


Annotated TAIR IDAT1G09800.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3177121-3180336 | Reverse length=372
E-Value3.7E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8146218492995
Replicate 20.4911415302058
Replicate 31.6074903576247
Condition 2: 8 Hour
Replicate 11.0023453487176
Replicate 20.65382695442063
Replicate 31.592246545648
Condition 3: 24 Hour
Replicate 11.2083056435634
Replicate 22.0636499546739
Replicate 31.2799827302279


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_125046.p1 GENE.R_Transcript_125046~~R_Transcript_125046.p1 ORF type:complete len:171 (+),score=29.20,PseudoU_synth_1|PF01416.16|3.5e-14 R_Transcript_125046:166-678(+)
ATGAGTTCTAAGCCCGGTTCCACTTCCCCACAACACTCAACGACGTCGTGTAACACCAGTTCCCAGTCGAAGCACTGCCTTGAGCAACGCTCAGAATCACCAGAGCAACGGCCTCTTAAGCTTGCAAAGATCGAAGAACAACAGCAGGAAGTAGAAGAAGGAGAGAGAGTAGAAAAGAACATGAACCCAAGACCTGGAATGCAGAGATACTTAGTAGCAGTTGAGTACATTGGCACTAAATTCTCTGGTTCTCAGCAACAGCCTAATCAAAGAACTGTTATGGGTGTTCTCCAGGAAGCTTTTCACAAATTTGTTGGGCAACCAGTTTCAGTCTTTTGCTCGAGTCGAACTGATGCAGGAGTTCATGCCTTATCAAATGTTTGCCATGTGGATGTGGAACGGATTAGTAAGAGGAAACCAGGTGAAGTGTTGCCACCTCATGAGCCTTCAGTAGTTACAAGAGCTATAAACCATTTTTTACAGCTATCATTACCGCTTGTTGTCTGGTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_125046.p1 GENE.R_Transcript_125046~~R_Transcript_125046.p1 ORF type:complete len:171 (+),score=29.20,PseudoU_synth_1|PF01416.16|3.5e-14 R_Transcript_125046:166-678(+)
MSSKPGSTSPQHSTTSCNTSSQSKHCLEQRSESPEQRPLKLAKIEEQQQEVEEGERVEKNMNPRPGMQRYLVAVEYIGTKFSGSQQQPNQRTVMGVLQEAFHKFVGQPVSVFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVTRAINHFLQLSLPLVVWS*

Click here to download the sequence:
Link to NCBI Protein BLAST