Transcript Information: R_Transcript_125166.p1


Annotated TAIR IDAT5G46420.1
Annotated Gene Name16S rRNA processing protein RimM family
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:18829999-18832893 | Forward length=653
E-Value2E-142
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47205933503583
Replicate 20.32580466163221
Replicate 30.55292125232092
Condition 2: 8 Hour
Replicate 10.92877418765413
Replicate 20.42408569009145
Replicate 30.78239700949944
Condition 3: 24 Hour
Replicate 10.94997823011189
Replicate 20.45631570118436
Replicate 30.79248585935318


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_125166.p1 GENE.R_Transcript_125166~~R_Transcript_125166.p1 ORF type:3prime_partial len:580 (+),score=110.65,RimM|PF01782.14|1e-17,PRC|PF05239.12|1.3e+04,PRC|PF05239.12|1.5e-11,UDPGP|PF01704.14|1.3e-05 R_Transcript_125166:68-1804(+)
ATGATGGTACTACAGAGCTCATTCTCTTTCATATGCTCTGGTAGACCCCTTAATATATCCTTTCACAATCCATGCCTTACTCCAAATTTAAACCCCTCTTCTTGTGTCACTCTTTTGCCCTTCAATAGACTCCAAGCTGCTGCTCATGGGCTCAGAGCCCCTCCCCTTTGTTGCACTGCTACTGAAGAGATTGTAGAGACAAGTGATGGACAGTTGGACTTTATTGAGATTGGGTACATATCTGATGTGCATGGGCTTCAGGGAGAGATTCGTGTAAAGCATAACACTGATTTCCCCGACTTGCGTTTTGGACAGCCTGGGAGAAAATGGTTGCGGCAGGAATATTCCGGAAGACAAAAAGTTTTTGAAGTTGAGCTTGTGACAGGAAGAGGCCATCCAGGGGACAAGAGTTGGATAGTCAAATTGAGTGGCTTTGACAGTATAGATCAGGCTAAACAGCTTGTTGGATCAACATTTCTTGTGAGGGAAAGTGACAGACCAGAGCTTGAGGAGGGCGAATTTTATAGTCGCGATCTTGTTGGCATGAGAGTTATTCTCAAGGACACAGGTGAAGTGGTAGGAACTGTTGTTAATGTCTTCAATAGTGGTGGCAATGATCTCTTGCACGTCATACTTGATTCTTCCACTGAGAATTCTGGGACATCTGAATCAGGCCAGCTTATCTGGATCCCATTTGTTGAAGCAATTGTTCCAGATGTTAATTTGGATAGAAGAGAGATGCAGATTACCCCTCCCAAAGGACTTCTTCAGTTAAATATACGCTCTGATGAGAGGTCCAAGAAAGAAAGACGTTTACTTGATTGGAAAGAAAGAAAGAAGTTTCAAAGGCGCCTTATTGCTGCGAAAAAGAAATTGTGTGAGTTGGAGCAGCAACACATCTTTGACGGGCTTAGATACGGAGAAAAATCCCAAAGGAGCTTGCTCGCAGAGCAAATTGTTTCCGTGAATTCAAGTCTGCTTCAGCAAGCACTTCAAGCCATTCAGGTGCCTAATAATGGATCTAATATGAGGGGCTTCGTGCATGCCGCTACGCAATTGAAAAGTCTGAGTTCCTTGAAGATAGCTGAGCAACACCTTGCAAGTGTTGGCAAAGAGAAGCTAGGTGTATACTCTAATCATAGAGAAACTGGACTTCATCTCCTCTCTGAAGGCAAAGTTGCAACCGTATTAGTACTGAACAGTGGAGAACCACAGAAAATCTCTGAGACTGATCTTGGAGATACTGAACATGGTGAACATTCAAGCATGACCGTCATTGAGACTTTGCTTTCGGACGCGCAAAAATTTGCAGAATGCCGTACATCTGTACCAGTTATCTTGATATCCTCAGCTCAAAATGTGCAAGCACTGGAAAACTTATTTGCAAGACATGACTATTTTGGTTTCAACTCGGAAAAGGTCAGATTCTTAGAAGAAGAGAAGCTCCCTGTTGTTAGCTGTTCTGCTGTAGAACAAAAGAAAAATAAAGTGCTGATGAAGTCACCTTGGGTAATACTCCAATCACCAATTGGGGATGGTGGCATAATACGTGCACTATCATCCTATAATATTGTGGAATATATGATTGAATCAGGTGTGGAGTATGTAGAGGTATGCAGCATCTATAGTAGATGCCTTTGTGGGAACCCTATGTTTCTTGGCTTTGTGGATTCCCATCAACCGGATATTGGAATTCTAACCTTTAAAGACATGGCACAACTTGAAGATAACTTCCAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_125166.p1 GENE.R_Transcript_125166~~R_Transcript_125166.p1 ORF type:3prime_partial len:580 (+),score=110.65,RimM|PF01782.14|1e-17,PRC|PF05239.12|1.3e+04,PRC|PF05239.12|1.5e-11,UDPGP|PF01704.14|1.3e-05 R_Transcript_125166:68-1804(+)
MMVLQSSFSFICSGRPLNISFHNPCLTPNLNPSSCVTLLPFNRLQAAAHGLRAPPLCCTATEEIVETSDGQLDFIEIGYISDVHGLQGEIRVKHNTDFPDLRFGQPGRKWLRQEYSGRQKVFEVELVTGRGHPGDKSWIVKLSGFDSIDQAKQLVGSTFLVRESDRPELEEGEFYSRDLVGMRVILKDTGEVVGTVVNVFNSGGNDLLHVILDSSTENSGTSESGQLIWIPFVEAIVPDVNLDRREMQITPPKGLLQLNIRSDERSKKERRLLDWKERKKFQRRLIAAKKKLCELEQQHIFDGLRYGEKSQRSLLAEQIVSVNSSLLQQALQAIQVPNNGSNMRGFVHAATQLKSLSSLKIAEQHLASVGKEKLGVYSNHRETGLHLLSEGKVATVLVLNSGEPQKISETDLGDTEHGEHSSMTVIETLLSDAQKFAECRTSVPVILISSAQNVQALENLFARHDYFGFNSEKVRFLEEEKLPVVSCSAVEQKKNKVLMKSPWVILQSPIGDGGIIRALSSYNIVEYMIESGVEYVEVCSIYSRCLCGNPMFLGFVDSHQPDIGILTFKDMAQLEDNFH

Click here to download the sequence:
Link to NCBI Protein BLAST