Transcript Information: R_Transcript_125168.p1


Annotated TAIR IDAT5G46420.1
Annotated Gene Name16S rRNA processing protein RimM family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:18829999-18832893 | Forward length=653
E-Value9.8E-200
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2388712671531
Replicate 22.6521642631113
Replicate 33.1690524193173
Condition 2: 8 Hour
Replicate 12.72474286631
Replicate 22.8917832155518
Replicate 33.1662959879171
Condition 3: 24 Hour
Replicate 13.0725486364897
Replicate 22.7527616359668
Replicate 34.0484025210351


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_125168.p1 GENE.R_Transcript_125168~~R_Transcript_125168.p1 ORF type:complete len:665 (+),score=126.62,RimM|PF01782.14|1.2e-17,PRC|PF05239.12|1.8e-11,UDPGP|PF01704.14|4.6e-06 R_Transcript_125168:68-2062(+)
ATGATGGTACTACAGAGCTCATTCTCTTTCATATGCTCTTCAAATTATCTAACTTCAACAACAAATTCACATTATGGTAGACTCCTTAATATACCCTTTCACAATCCATGCCTTACTCCAAATTTAAACCCCTCTTCTCGTGTCACTCTTTTGCCCTTGAACAGAGTCCAAGCTGCTGGTCATGGGCTCAGAGCCCCTCCCCTTTGTTGCACTGCTACTGAAGAGATTGTAGAGACAAGTGATGGACAGTTGGACTTTATTGAGATTGGGTACATATCTGATGTGCATGGGCTTCAGGGAGAGATTCGTGTAAAGCATAACACTGATTTCCCCGACTTGCGTTTTGGACAGCCTGGGAGAAAATGGTTGCGGCAGGAATATTCCGGAAGACAAAAAGTTTTTGAAGTTGAGCTTGTGACAGGAAGAGGCCATCCAGGGGACAAGAGTTGGATAGTCAAATTGAGTGGCTTTGACAGTATAGATCAGGCTAAACAGCTTGTTGGATCAACATTTCTTGTGAGGGAAAGTGACAGACCAGAGCTTGAGGAGGGCGAATTTTATAGTCGCGATCTTGTTGGCATGAGAGTTATTCTCAAGGACACAGGTGAAGTGGTAGGAACTGTTGTTAATGTCTTCAATAGTGGTGGCAATGATCTCTTGCACGTCATACTTGATTCTTCCACTGAGAATTCTGGGACATCTGAATCAGGCCAGCTTATCTGGATCCCATTTGTTGAAGCAATTGTTCCAGATGTTAATTTGGATAGAAGAGAGATGCAGATTACCCCTCCCAAAGGACTTCTTCAGTTAAATATACGCTCTGATGAGAGGTCCAAGAAAGAAAGACGTTTACTTGATTGGAAAGAAAGAAAGAAGTTTCAAAGGCGCCTTATTGCTGCGAAAAAGAAATTGTGTGAGTTGGAGCAGCAACACATCTTTGACGGGCTTAGATACGGAGAAAAATCCCAAAGGAGCTTGCTCGCAGAGCAAATTGTTTCCGTGAATTCAAGTCTGCTTCAGCAAGCACTTCGAGCCATTCAGGTGCCTATTAATGGATCTAATATGAGCGGCTCCATGCATGACACTATGCAATGGAAAAGTCTGAGTCCCTTGACGATCTCCGAGCAACACCTTGTAAGTGTGGGCAAAGAGAAGCTACATGCTTACTCTAATCATAAAGAAACTGGACTTCATCTCCTCTCTGAAGGCAAAGTTGCAACCGTATTAGTACTGAACAGTGGAGAACCACAGAAAATCTCTGAGACTGATCTTGGAGATACTGAGCATGGTGAACATTCAAGCATGACTGTCATTGAGACTTTGCTTTTGGACATGCAAAAATTTGCAGAACACCGTGCATCTGTACCAGTTATCTTGATATCCTCAGCTCAAAATGTGCAAGCACTGGAAAACTTATTTGCAAGACATGACTATTTTGGTTTCAACTCGGAAAAGGTCAGATTCTTAGAAGAAGAGAAGCTCCCTGTTGTTAGCTGTTCTGCTGTAGAACAAAAGAAAAATAAAGTGCTGATGAAGTCACCTTGGGTAATACTCCAATCACCAATTGGGGATGGTGGCATAATACGTGCACTATCATCCTATAATATTGTGGAATATATGATTGAATCAGGTGTGGAGTATGTAGAGGTCTGCAGCATCAATAGGAGATGCCTTTGTGGTAACCCGATGTTTTTTGGCTTTGTGGATTCCCATCAACCGGATATTGGAATTCTAACCTTTAAAGACATGGCACAACTTGAAGATAACTTCCACATCGTCCTCCCTATGAAGTCTATGAATAAGTTGGTAAACCAGATTGACAAACTCCAGTTTGATGCCATCATGAAGTGCAATTCACATGTCGAGCTGGTTAATAAGGAGTGGATTGATGTTATCCCTTCGGAGACCAACTCTTATGAGTTTCGCTGTTCGCTTGACAACTTGTTGAATGCTTGTTCATTGCAAAAAGCTTGCCTTATGGAGGTTGCTGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_125168.p1 GENE.R_Transcript_125168~~R_Transcript_125168.p1 ORF type:complete len:665 (+),score=126.62,RimM|PF01782.14|1.2e-17,PRC|PF05239.12|1.8e-11,UDPGP|PF01704.14|4.6e-06 R_Transcript_125168:68-2062(+)
MMVLQSSFSFICSSNYLTSTTNSHYGRLLNIPFHNPCLTPNLNPSSRVTLLPLNRVQAAGHGLRAPPLCCTATEEIVETSDGQLDFIEIGYISDVHGLQGEIRVKHNTDFPDLRFGQPGRKWLRQEYSGRQKVFEVELVTGRGHPGDKSWIVKLSGFDSIDQAKQLVGSTFLVRESDRPELEEGEFYSRDLVGMRVILKDTGEVVGTVVNVFNSGGNDLLHVILDSSTENSGTSESGQLIWIPFVEAIVPDVNLDRREMQITPPKGLLQLNIRSDERSKKERRLLDWKERKKFQRRLIAAKKKLCELEQQHIFDGLRYGEKSQRSLLAEQIVSVNSSLLQQALRAIQVPINGSNMSGSMHDTMQWKSLSPLTISEQHLVSVGKEKLHAYSNHKETGLHLLSEGKVATVLVLNSGEPQKISETDLGDTEHGEHSSMTVIETLLLDMQKFAEHRASVPVILISSAQNVQALENLFARHDYFGFNSEKVRFLEEEKLPVVSCSAVEQKKNKVLMKSPWVILQSPIGDGGIIRALSSYNIVEYMIESGVEYVEVCSINRRCLCGNPMFFGFVDSHQPDIGILTFKDMAQLEDNFHIVLPMKSMNKLVNQIDKLQFDAIMKCNSHVELVNKEWIDVIPSETNSYEFRCSLDNLLNACSLQKACLMEVAD*

Click here to download the sequence:
Link to NCBI Protein BLAST