Transcript Information: R_Transcript_125170.p1


Annotated TAIR IDAT5G46420.1
Annotated Gene Name16S rRNA processing protein RimM family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:18829999-18832893 | Forward length=653
E-Value2E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.35442642630522
Replicate 20.10192378842863
Replicate 30.11119775532113
Condition 2: 8 Hour
Replicate 10.23772684414801
Replicate 20.65128782061706
Replicate 30.61680230263451
Condition 3: 24 Hour
Replicate 10.33433699846171
Replicate 20.42825745418597
Replicate 31.0625099362571


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_125170.p1 GENE.R_Transcript_125170~~R_Transcript_125170.p1 ORF type:3prime_partial len:206 (+),score=43.84,RimM|PF01782.14|1.4e-18 R_Transcript_125170:68-682(+)
ATGATGGTACTACAGAGCTCATTCTCTTTCATATGCTCTTCAAATTATCTATCTTCAACAGCAGCAACTTCACATTCTGGTAGACCCCTTAATATATCCTTTCACAATCCATGCCTTACTCCAAATTTAAACCCCTCTTCTTGTGTCACTCTTTTGCCCTTCAATAGACTCCAAGCTGCTGCTCATGGGCTCAGAGCCCCTCCCCTTTGTTGCACTGCTACTGAAGAGATTGTAGAGACAAGTGATGGACAGTTGGACTTTATTGAGATTGGGTACATATCTGATGTGCATGGGCTTCAGGGAGAGATTCGTGTAAAGCATAACACTGATTTCCCCGACTTGCGTTTTGGACAGCCTGGGAGAAAATGGTTGCGGCAGGAATATTCCGGAAGACAAAAAGTTTTTGAAGTTGAGCTTGTGACAGGAAGAGGCCATCCAGGGGACAAGAGTTGGATAGTCAAATTGAGTGGCTTTGACAGTATAGATCAGGCTAAACAGCTTGTTGGATCAACATTTCTTGTGAGGGAAAGTGACAGACCAGAGCTTGAGGAGGGCGAATTTTATAGTCGCGATCTTGTTGGCATGAGAGTTATTCTCAAGGACACAGGTGAAGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_125170.p1 GENE.R_Transcript_125170~~R_Transcript_125170.p1 ORF type:3prime_partial len:206 (+),score=43.84,RimM|PF01782.14|1.4e-18 R_Transcript_125170:68-682(+)
MMVLQSSFSFICSSNYLSSTAATSHSGRPLNISFHNPCLTPNLNPSSCVTLLPFNRLQAAAHGLRAPPLCCTATEEIVETSDGQLDFIEIGYISDVHGLQGEIRVKHNTDFPDLRFGQPGRKWLRQEYSGRQKVFEVELVTGRGHPGDKSWIVKLSGFDSIDQAKQLVGSTFLVRESDRPELEEGEFYSRDLVGMRVILKDTGEV

Click here to download the sequence:
Link to NCBI Protein BLAST