Transcript Information: R_Transcript_12543.p1


Annotated TAIR IDAT5G57000.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 153 Blast hits to 116 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 33; Fungi - 7; Plants - 82; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23063870-23065203 | Reverse length=187
E-Value5E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9869711931477
Replicate 24.8711416965811
Replicate 37.1469021299996
Condition 2: 8 Hour
Replicate 12.9383037936694
Replicate 210.196562119581
Replicate 38.1319215579334
Condition 3: 24 Hour
Replicate 15.6935361924706
Replicate 23.705283493617
Replicate 34.7277442123698


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12543.p1 GENE.R_Transcript_12543~~R_Transcript_12543.p1 ORF type:internal len:125 (+),score=18.77 R_Transcript_12543:2-373(+)
CTTAGATTCCTTACGCCATCAATCAATTCTCAATTGATACACATTTTCTGGGTTTTAAAGCATTCACAATCCCATTTTCATCTTGCTTCAAAACTGACAAAAAAACAGAGACAATTTTCTCTAATGGCTGAAACAAATCGAGCAGATCATCGTCATCCGGAAAAAGAAAAGTGTCCAAACCTGATTGAAGCAGCCTTCCATCATAAGAAATCACCACGTCACCACAAAGAAACTCATGGGACAAGTGATGATATTGACGAAAACACACCAGTCGACGAAATCAAGGCTCCAAATGTATTTGAACGGGTGAAGGAAGAGGTCGAGGCTATAGTTGGATCAATTCATCGTAAAAAGGATTCAGAAGATCATAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12543.p1 GENE.R_Transcript_12543~~R_Transcript_12543.p1 ORF type:internal len:125 (+),score=18.77 R_Transcript_12543:2-373(+)
LRFLTPSINSQLIHIFWVLKHSQSHFHLASKLTKKQRQFSLMAETNRADHRHPEKEKCPNLIEAAFHHKKSPRHHKETHGTSDDIDENTPVDEIKAPNVFERVKEEVEAIVGSIHRKKDSEDHK

Click here to download the sequence:
Link to NCBI Protein BLAST