Transcript Information: R_Transcript_12548.p1


Annotated TAIR IDAT5G57000.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 153 Blast hits to 116 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 33; Fungi - 7; Plants - 82; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23063870-23065203 | Reverse length=187
E-Value5.4E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7477575630759
Replicate 23.1607333960019
Replicate 32.9557080769229
Condition 2: 8 Hour
Replicate 12.3695998336044
Replicate 26.9727481010149
Replicate 33.5132149587846
Condition 3: 24 Hour
Replicate 12.9622977068005
Replicate 22.3715332140406
Replicate 32.5888682962997


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12548.p1 GENE.R_Transcript_12548~~R_Transcript_12548.p1 ORF type:3prime_partial len:93 (+),score=21.07 R_Transcript_12548:352-627(+)
ATGGCTGAACCAAATCGAGCAGATCATCATCATCATCCGGAAAAAGAAGTGAATTCTCCAAACCTGATTGAAAGAGCCAGAGAGGGGATTGAAGCAGCCTTCCATCATAAGAAATCACCACGTCACCACAAAGAAACTCATGGGACAAGTGACGATATTGACGAGAACACACCAGTCGACGAAATCAAAGCTCCAAATGTATTTGAACGGGTGAAGGAAGAGGTCGAGGCTATAGTTGGATCAATTCATCGTAAAAAGGATTCAGAAGATCATAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12548.p1 GENE.R_Transcript_12548~~R_Transcript_12548.p1 ORF type:3prime_partial len:93 (+),score=21.07 R_Transcript_12548:352-627(+)
MAEPNRADHHHHPEKEVNSPNLIERAREGIEAAFHHKKSPRHHKETHGTSDDIDENTPVDEIKAPNVFERVKEEVEAIVGSIHRKKDSEDHK

Click here to download the sequence:
Link to NCBI Protein BLAST