Transcript Information: R_Transcript_125488.p1


Annotated TAIR IDAT4G18750.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)DOT4
Annotation TypeHomolog
Chromosome Positionchr4:10304850-10307465 | Forward length=871
E-Value4E-124
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8910725313447
Replicate 21.1979871108398
Replicate 31.5821470411757
Condition 2: 8 Hour
Replicate 11.0662013265317
Replicate 21.2758461110586
Replicate 32.2076283186957
Condition 3: 24 Hour
Replicate 12.4129827416506
Replicate 22.2850042994742
Replicate 32.6291537161438


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_125488.p1 GENE.R_Transcript_125488~~R_Transcript_125488.p1 ORF type:complete len:666 (+),score=118.47,PPR_2|PF13041.2|3.4e-06,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|3.9e-07,PPR_2|PF13041.2|0.00077,PPR_2|PF13041.2|3.3e-09,PPR_2|PF13041.2|1.1e+04,PPR_2|PF13041.2|4.5e+03,PPR|PF01535.16|0.025,PPR|PF01535.16|1.2e+04,PPR|PF01535.16|0.062,PPR|PF01535.16|1.4e+04,PPR|PF01535.16|0.068,PPR|PF01535.16|3.5e-06,PPR|PF01535.16|0.0045,PPR|PF01535.16|9.9e-08,PPR|PF01535.16|4.7e+02,PPR|PF01535.16|87,PPR|PF01535.16|2.3e+03,PPR|PF01535.16|3.6e+02,PPR|PF01535.16|6.1e+03,DYW_deaminase|PF14432.2|2.4e+03,DYW_deaminase|PF14432.2|9.1e-30,PPR_3|PF13812.2|0.042,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|0.27,PPR_3|PF13812.2|0.0056,PPR_3|PF13812.2|10,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|94,PPR_1|PF12854.3|5e+02,PPR_1|PF12854.3|16,PPR_1|PF12854.3|3.5,PPR_1|PF12854.3|4.6,PPR_1|PF12854.3|0.054,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|6.5e+02,PPR_1|PF12854.3|6.4e+03 R_Transcript_125488:417-2414(+)
ATGGAAGCACTTACGTTTCCACAGTCATCTCCATGCTTGAGGTTGCAATCTCAGAGATACTTTTATGCAAGGGATCATGCCAGGAGTAATTTTCATTCTCGAATTCATATGCGAGTGGCATCCAAGTTGGAAGAACTGACAGTGACTCGCCAACCTGTGCTTGATAAAATGCCTACAACAGATACCTTTGCTTGGAACCATTTGATTCGAACACACCTTGCTAATGGCGAGCTTGATAGTGTCATGCACGTATATCAGGAAATGCTGATGCAAGGTGTTCGTCCTGATAAGCACACTCTCCCGCGTATTTTGGCTGCTTCTCGCCTTTCAAATTCCTTGTTCCTTGGGAAACAGGTTCACTGTCATGCTGTTAAACTAGGTGTTTCTTCTGAGGATTATGTGATTACTGCCTTGATGAAAATGTATGGCCATTTAGATGGTGCCAATACAGTAAAACAGATCTTTGATAAGTCAAGCATCGGGAAAAGTTCTATATCAGGGACCTTGCTAATTTCAATGTACTTGAAGGAAAATAAACCCAGGTTGGCTATTGATATGTTCTATAAAATTGTCAGTTCAGGTGTCAAGATTGATGCAGTTGCAATAATGACTGCAATAGGGGCTTGTGGAATGCTGAAATCCCTTGAAGATGGGCGAAAGGTGCATGGGATCGCTAAGGTCAACGGACTGCAATCTCATATCTTGGTTTGTAATTCTCTGTTGAAAATGTACTTGGATTGTGGAAGCATTAAGGATGCTCGCGATGTGTTTGACAATATGTCGTCTAGAGATTCCATCTCTTGGACAGAAATGATTCGTGGGTATGTGAAAAGTGGTGGGTTCAATGAAGGCATCAAATTGTTCAAGAAAATGGTATCTGAGGGCATTCAACCTGATCCACCTGCAGTTGCTAGCATTCTACCAGCTTGTGCGAGGATGACAGCGCATAAGCAAGGCAAAGAAATTCATGGTTACTTGATTAGGAATGGTGTTGACATGAATGTTACGGTCCAGAATGCTTTGTTGGATATGTATGTAAAATCAGGGTCCATTGAATTGGCTTCAAGAATTTTCAATGAGATGACTACTAAAGATAGTGTTTCATGGACAATTATGATCCATGGTTACAGTCTCCATGGTCAAGGAAGAAAAGGGGTTGAATTGTTCCATGAAATGCAGAAAAATAATCTTGTAATTGATGAGGTCACATATGCTTCTGCCCTTCATGCTAGTGTGGTGGCAAATTTGGTTGAGGAAGGCAAGACTTTATTTAGTCTCATTAGGAGACCTGAAGTAAGACATTATGCTTTGATGGTTTTGCTTCTATCCCGTGCTGGACTTTTTGATGAGGCAAAGGTCTTCATTGAGAAAAACCGAATTGGACAGCAGGCAGAGGTGGCAAGAGCTCTATTAGACGGGTGCAGGATTCATCGAAATGTAAAAGCAGGTAAGAAACTTATTGAGCAGCTCTGTGATTTAGAACCACTTAATGCTGACAACTATGTTCTGTTGTCAAATTGGTATGCTAGCAATTCAAAATGGGACATGGTAGACAAGTTGAGAGAAACAATCAGAGACATGGGTTTGTCACCTAGGAGAGGTTATAGCTGGATAGAGTTCCACAATAAAATTCATGTATTTGGGACTGGGGATCTGTCCCACCCAAGATCTGAAAAACTGTACTGGGAATTGCAATGTTTGGTAAAGAAAATGGAGGAAGAGGGCCATAAATTTGACTCGGACTTCAGTCTCCATGACGTGGATGAAGAGAGAGAATGCACTATGACAGGACACAGTGAATTGCTGGCTATAACTTTTGGCCTAATTAGTAACCAGGAGACCACAATCCGTGTTACGAAAAACCTTCATGTTTGTCGCAACTGCCATGATATGGCAAAAGTTATATCAAGACTAGTTGCTCGTGAGATCATCATAAAGGATCCGAATAGTTTCCATCATTTTAAGGATGGACATTGTTCTTGTGGGGACTTCTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_125488.p1 GENE.R_Transcript_125488~~R_Transcript_125488.p1 ORF type:complete len:666 (+),score=118.47,PPR_2|PF13041.2|3.4e-06,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|3.9e-07,PPR_2|PF13041.2|0.00077,PPR_2|PF13041.2|3.3e-09,PPR_2|PF13041.2|1.1e+04,PPR_2|PF13041.2|4.5e+03,PPR|PF01535.16|0.025,PPR|PF01535.16|1.2e+04,PPR|PF01535.16|0.062,PPR|PF01535.16|1.4e+04,PPR|PF01535.16|0.068,PPR|PF01535.16|3.5e-06,PPR|PF01535.16|0.0045,PPR|PF01535.16|9.9e-08,PPR|PF01535.16|4.7e+02,PPR|PF01535.16|87,PPR|PF01535.16|2.3e+03,PPR|PF01535.16|3.6e+02,PPR|PF01535.16|6.1e+03,DYW_deaminase|PF14432.2|2.4e+03,DYW_deaminase|PF14432.2|9.1e-30,PPR_3|PF13812.2|0.042,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|0.27,PPR_3|PF13812.2|0.0056,PPR_3|PF13812.2|10,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|94,PPR_1|PF12854.3|5e+02,PPR_1|PF12854.3|16,PPR_1|PF12854.3|3.5,PPR_1|PF12854.3|4.6,PPR_1|PF12854.3|0.054,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|6.5e+02,PPR_1|PF12854.3|6.4e+03 R_Transcript_125488:417-2414(+)
MEALTFPQSSPCLRLQSQRYFYARDHARSNFHSRIHMRVASKLEELTVTRQPVLDKMPTTDTFAWNHLIRTHLANGELDSVMHVYQEMLMQGVRPDKHTLPRILAASRLSNSLFLGKQVHCHAVKLGVSSEDYVITALMKMYGHLDGANTVKQIFDKSSIGKSSISGTLLISMYLKENKPRLAIDMFYKIVSSGVKIDAVAIMTAIGACGMLKSLEDGRKVHGIAKVNGLQSHILVCNSLLKMYLDCGSIKDARDVFDNMSSRDSISWTEMIRGYVKSGGFNEGIKLFKKMVSEGIQPDPPAVASILPACARMTAHKQGKEIHGYLIRNGVDMNVTVQNALLDMYVKSGSIELASRIFNEMTTKDSVSWTIMIHGYSLHGQGRKGVELFHEMQKNNLVIDEVTYASALHASVVANLVEEGKTLFSLIRRPEVRHYALMVLLLSRAGLFDEAKVFIEKNRIGQQAEVARALLDGCRIHRNVKAGKKLIEQLCDLEPLNADNYVLLSNWYASNSKWDMVDKLRETIRDMGLSPRRGYSWIEFHNKIHVFGTGDLSHPRSEKLYWELQCLVKKMEEEGHKFDSDFSLHDVDEERECTMTGHSELLAITFGLISNQETTIRVTKNLHVCRNCHDMAKVISRLVAREIIIKDPNSFHHFKDGHCSCGDFW*

Click here to download the sequence:
Link to NCBI Protein BLAST