Transcript Information: R_Transcript_12551.p1


Annotated TAIR IDAT1G14610.1
Annotated Gene Namevalyl-tRNA synthetase / valine--tRNA ligase (VALRS)
Annotated Gene Symbol(s)TWN2, VALRS
Annotation TypeOrtholog
Chromosome Positionchr1:5008502-5014486 | Reverse length=1108
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.927113282533
Replicate 213.669466416861
Replicate 319.446865771734
Condition 2: 8 Hour
Replicate 116.005083598329
Replicate 218.478784299313
Replicate 324.312443738939
Condition 3: 24 Hour
Replicate 127.959898906657
Replicate 221.729790660421
Replicate 326.599641112549


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12551.p1 GENE.R_Transcript_12551~~R_Transcript_12551.p1 ORF type:complete len:1152 (+),score=283.77,tRNA-synt_1|PF00133.18|1.5e+04,tRNA-synt_1|PF00133.18|5.2e-201,Anticodon_1|PF08264.9|1.2e-36,tRNA-synt_1g|PF09334.7|6.3e-07,tRNA-synt_1g|PF09334.7|0.016,tRNA-synt_1g|PF09334.7|1.5,tRNA-synt_1g|PF09334.7|2.4e+03,tRNA-synt_1_2|PF13603.2|1.6e+04,tRNA-synt_1_2|PF13603.2|50,tRNA-synt_1_2|PF13603.2|3.7e-07 R_Transcript_12551:306-3458(+)
ATGGAAGATCTTGAGAGGAAGAAGAAGAAGGAAGAGAAGGCAAAAGAAAAAGAATTGAAGAAACAAAAGGCTGCACTCAAAGCAGAAGCTGCTAAACTTAAGGTTCAACAATCATCTAATGCCCCCAAAAAGAGTGAGAGGAAGAATGTAAAGAAAGATGCAGAGGAAGAGAACCCTAAGGATTATTTAGATCCTGAAACCCCCCTCGGTGAGAAGAAACAGCTTTCCCGTGTAATGGCAAAACAATATTCACCTGCTGCAGTGGAAAAATCATGGTATGCTTGGTGGGAAAACTCTGGATATTTCACCGCTGATCCTGATAGCTCAAAGCCGCCTTTTGTGATTGTGCTGCCACCTCCGAATGTGACTGGGGCTCTTCACATAGGTCATGCTCTTACTAGTTCAATAGAGGATACCATTATTCGCTGGCGAAGAATGTCTGGATACAATACCCTATGGGTTCCTGGAATGGACCATGCTGGGATAGCAACACAGGTTGTTGTTGAAAAGAAGATAATGCGGGAAAGGAATCTGACCAGGCATGATCTTGGCCGAGAAAAATTTGTGACCGAAGTGTGGAACTGGAAAAATGAGTTTGGTGGCAAAATATTGAAGCAGCAGCGTGAACTTGGTGCAACACTCGACTGGTCAAGAGAGTGTTTTACAATGGATGAGAAACGATCAAAGGCAGTAACCGAGGCATTTGTAAGGCTGTATAATGAAGGCCTCATTTATAGGGATCTTCGATTAGTGAACTGGGATTGTGTGCTAAGAACTGCAATATCTGATATTGAGGTGGACTATGAAGATGTCAAAGGAAGGACATTATTAAAAGTTCCTGGTTACAAAGACCCAGTAGAGTTTGGTGTTTTAACGTCATTTGCTTACCCATTAGAAGGAAACCTTGGTGAAATTGTTGTTGCCACTACTAGGGTAGAAACAATGCTTGGTGATACAGCAATCGCTGTACATCCAGATGACTCTAGGTACAAGCACTTGCATAACAAAGTGGCTGTCCATCCTTTTAATGGAAGAAAGATACCAATTATTTGTGATGCCATACTTGTTGATCCAACGTTTGGTACTGGTGCTGTTAAGATCACACCTGCCCATGATCCTAATGATTTTGAGGTTGGGAAGCGTCACAAGCTTGAGTTTATCAACATTTTTACAGATGATGGGAAAATAAATAGCAATGGTGGCCGAGATTTTGTGGGGATGCCACGTTTTGAAGCACGTGTGGCAGTTACTAAAGCGTTGCAGGATAAGGGACTGTATAGGGGTATAAAGGACAATGAGATGCGTCTTGGGCGTTGTTCAAGAAGTAATGATATTGTGGAACCAATGATAAAGCCTCAGTGGTATGTTAATTGCAATTCTATGGCGAAGGATGCACTTGATGCTGTTATGGATGAGGAAAATAGAAAGATTGAGATTATTCCGAAACAGTATGCTGCTGAGTGGAAGAGGTGGCTTGAAAATATTCGCGACTGGTGCATTTCAAGGCAGCTTTGGTGGGGTCATAGGGTACCTGCTTGGTATGTTACAATGGAGGATGACGATCTGAAGGAACTCGGTGCTTATGATGACCATTGGATTGTTAGTAGAAGCGAGGAAGATGCACGAGAGGAGGCTGGTAAAAGGTTTGCAGGGAAGAAATTTCAGATTACTCAAGATCCTGATGTATTAGATACCTGGTTTTCTTCTGGTCTTTTCCCATTATCTGTGTTGGGCTGGCCGGATGAGACTGATGAGTTGAAGGCTTTTTATCCCACTTCTGTTCTTGAAACTGGACATGACATCCTTTTTTTCTGGGTTGCTCGGATGGTGATGTTAGGGATGAAACTTGGAGGGGATGTGCCTTTCAGAAAGGTATATTTGCATCCTATGATCCGTGATGCCCATGGGCGTAAGATGTCAAAGTCATTGGGAAATGTTGTTGATCCTCTTGAAGTGATTCATGGAATATCTCTAGAAGGTCTTCACAAGCGACTGGAGGAAGGAAACTTGGATCCTAGTGAGCTTTCTATAGCAAAAGATGGACAAAAGAAAGACTTCCCCAATGGCATTCCAGAATGTGGTGCAGATGCACTTCGTTTTGCCCTTGTTTCTTATACAGCTCAGTCTGATAAAATAAACTTGGACATTCAAAGAGTGGTGGGGTATCGCCAATGGTGCAATAAACTATGGAATGCTATTAGGTTCGCTATCGGCAAACTGGGAGATGATTACACTCCTCCTGCCAGTATAACTCCTAATGTCATGCCATTCAGTTGTCAGTGGATACTCTCGGTCTTGAACAAGGCTGTTGACAAGACTGTTTCATCACTCGAGGCATATCAATTTTCTGATGCAGCCACTGCAGTTTACTCATGGTGGCAATTCCAACTTTGTGATGTATTCATTGAAGTAATAAAACCTTACTTTTCCAATAATGATCAGTCATCTGCAAGAGGTTTTGCTCAGGATGCACTGTGGGTGTGCCTTGATACTGGGCTTAGGCTCCTGCATCCGTTTATGCCATTTGTGACAGAAGAGTTGTGGCAGAGACTTCCTCAGGCGAAAAATACTGTGAGGAAAGAATCTATTGTCATCAGCGAATACCCGACTGTTATACAGTCGTGGACCAATGAAAGGTTGGAGCATGAAATGGAACTGGTTGAGTCTGCAGTGAAGTCGTTTAGGTCTCTTAAGTCACTATTACCTGCTAAAGAAAGACATGAAAGGAGACAAGCTTTTGCACTTTGCCAGACTGAGGAAATCGCTGAAGTCATCCGGAGCCATGAGTTTGAAATTTTAACTCTTGCCAGTCTGTCATCTCTGCAGATTCTGAATGAGAATGATGCTGCTCCTATTGGGTGTTCAGTTGATGTTGTGAATGAAAACCTTTCTGTTTATCTCAAGCTTAAGGGAACAATTAACGCAGAACTAGAGCGTGAGAAGCTGAGGAAGAAGATGGACGAGACAAAGAGGCAACAAGAGACTTTGCAAAAGATGATGGATGCTTCTGGTTATAAAGAAAAGGTTCCTCCTCATATTCATGAAGAAAATGTGGTGAAGCTGGCCAAGCTCCTGCAGGAGGTCTCGTTGCTTGAAGAAGCAAGCCAGCACCTCGAACAAGATATTGCTGCTCAAGTATCCGCAGGAAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12551.p1 GENE.R_Transcript_12551~~R_Transcript_12551.p1 ORF type:complete len:1152 (+),score=283.77,tRNA-synt_1|PF00133.18|1.5e+04,tRNA-synt_1|PF00133.18|5.2e-201,Anticodon_1|PF08264.9|1.2e-36,tRNA-synt_1g|PF09334.7|6.3e-07,tRNA-synt_1g|PF09334.7|0.016,tRNA-synt_1g|PF09334.7|1.5,tRNA-synt_1g|PF09334.7|2.4e+03,tRNA-synt_1_2|PF13603.2|1.6e+04,tRNA-synt_1_2|PF13603.2|50,tRNA-synt_1_2|PF13603.2|3.7e-07 R_Transcript_12551:306-3458(+)
MEDLERKKKKEEKAKEKELKKQKAALKAEAAKLKVQQSSNAPKKSERKNVKKDAEEENPKDYLDPETPLGEKKQLSRVMAKQYSPAAVEKSWYAWWENSGYFTADPDSSKPPFVIVLPPPNVTGALHIGHALTSSIEDTIIRWRRMSGYNTLWVPGMDHAGIATQVVVEKKIMRERNLTRHDLGREKFVTEVWNWKNEFGGKILKQQRELGATLDWSRECFTMDEKRSKAVTEAFVRLYNEGLIYRDLRLVNWDCVLRTAISDIEVDYEDVKGRTLLKVPGYKDPVEFGVLTSFAYPLEGNLGEIVVATTRVETMLGDTAIAVHPDDSRYKHLHNKVAVHPFNGRKIPIICDAILVDPTFGTGAVKITPAHDPNDFEVGKRHKLEFINIFTDDGKINSNGGRDFVGMPRFEARVAVTKALQDKGLYRGIKDNEMRLGRCSRSNDIVEPMIKPQWYVNCNSMAKDALDAVMDEENRKIEIIPKQYAAEWKRWLENIRDWCISRQLWWGHRVPAWYVTMEDDDLKELGAYDDHWIVSRSEEDAREEAGKRFAGKKFQITQDPDVLDTWFSSGLFPLSVLGWPDETDELKAFYPTSVLETGHDILFFWVARMVMLGMKLGGDVPFRKVYLHPMIRDAHGRKMSKSLGNVVDPLEVIHGISLEGLHKRLEEGNLDPSELSIAKDGQKKDFPNGIPECGADALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAIRFAIGKLGDDYTPPASITPNVMPFSCQWILSVLNKAVDKTVSSLEAYQFSDAATAVYSWWQFQLCDVFIEVIKPYFSNNDQSSARGFAQDALWVCLDTGLRLLHPFMPFVTEELWQRLPQAKNTVRKESIVISEYPTVIQSWTNERLEHEMELVESAVKSFRSLKSLLPAKERHERRQAFALCQTEEIAEVIRSHEFEILTLASLSSLQILNENDAAPIGCSVDVVNENLSVYLKLKGTINAELEREKLRKKMDETKRQQETLQKMMDASGYKEKVPPHIHEENVVKLAKLLQEVSLLEEASQHLEQDIAAQVSAGN*

Click here to download the sequence:
Link to NCBI Protein BLAST