Transcript Information: R_Transcript_125541.p1


Annotated TAIR IDAT5G47090.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2052, coiled-coil (InterPro:IPR018613); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19127274-19128493 | Forward length=310
E-Value1.3E-130
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.9212790774898
Replicate 25.1702601625719
Replicate 36.8101111772345
Condition 2: 8 Hour
Replicate 17.5737059746734
Replicate 211.146866022933
Replicate 313.027732547365
Condition 3: 24 Hour
Replicate 16.8252940406688
Replicate 27.1530569374845
Replicate 39.7935975926357


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_125541.p1 GENE.R_Transcript_125541~~R_Transcript_125541.p1 ORF type:complete len:333 (+),score=82.71,DUF2052|PF09747.5|4e-48 R_Transcript_125541:130-1128(+)
ATGGAGGAAGAGACGGGGAAAACAGGTGGTGTGATAAGCAAAGAAGCGAAAGAGAGAATAACAGAGCGATTATCGCCATTAGAGAATCTCTATTTCCCCAGAGCTCTTATTCCTGACGCTTCTACCCCTTCTCAACGCAAATCCCTTCTTCTCGACCTCCTTTCCCGTGACGTCCCCGTTTTCTTAGAGCGCTATGGGGCACAGTTGACCTTAGAAGAGCTTGGAGAATTCGATGTTTTAAAAGGTGACTATGAGATCAATTGGCACTTGAAGCATCTAAGAAGCTTACTTATTCCGACTTCAGAGCAACTGCGATCCCGTTCATTAACTATAAAGAACAGGAGAAGGGCATACATGGATAAACTTGTTAGTGAAGGGAATTACTTTTCTGAGGATGCTATGAGAGAGAGGGAACCATATTTGCACAATGAATATCTTGGTAAGTTTCAGGCCCCTTACGGTAGAAGCATGGCTAGGCCAGGGGAGCGGTGGTCAGAAACACTAATGAGACGAGCCGAAGAGGCCATTTTACTTGCAAAAATTAGATGCGAGCAGCAAAGGTTAGGTGTTGATGAGAATGAATGGGTCGGTAATGAAAGGACCAAGATGGAGGTGGAGGAGGAAGAAGAAGAGGAAGAGGAAGAGGAATTGGAGGACGAAGAGGAAGAGGAATCGGAGGAGGAGGAGAAAGAGGAGGTTAAAGCTAATGGGGACTCAATTGCTTCCCAGCCTGTACATGATCAAGATAGAGCAGCCACTGGTGTTCCTTCTTCCAGTTCAGGGAGCGTCAACAGACCAATGTTATCCCCGGCTGAAATGCAGGAGCAGTTGGATCAGTTCACGTACATAATGCAACAGAAATTTCTGTCAGGTCAAGATCATGAACACATCAATTATTCCAAGATTGATGAAGACGAGACCTTAGATGATCACTGGTTAAAAGAAGTTAATCATGATGCTGAGGAGAAGTACTTTGCTGAGGATTCAAAATCAGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_125541.p1 GENE.R_Transcript_125541~~R_Transcript_125541.p1 ORF type:complete len:333 (+),score=82.71,DUF2052|PF09747.5|4e-48 R_Transcript_125541:130-1128(+)
MEEETGKTGGVISKEAKERITERLSPLENLYFPRALIPDASTPSQRKSLLLDLLSRDVPVFLERYGAQLTLEELGEFDVLKGDYEINWHLKHLRSLLIPTSEQLRSRSLTIKNRRRAYMDKLVSEGNYFSEDAMREREPYLHNEYLGKFQAPYGRSMARPGERWSETLMRRAEEAILLAKIRCEQQRLGVDENEWVGNERTKMEVEEEEEEEEEEELEDEEEEESEEEEKEEVKANGDSIASQPVHDQDRAATGVPSSSSGSVNRPMLSPAEMQEQLDQFTYIMQQKFLSGQDHEHINYSKIDEDETLDDHWLKEVNHDAEEKYFAEDSKSE*

Click here to download the sequence:
Link to NCBI Protein BLAST