Transcript Information: R_Transcript_125564.p1


Annotated TAIR IDAT5G16180.1
Annotated Gene NameOrtholog of maize chloroplast splicing factor CRS1
Annotated Gene Symbol(s)CRS1, ATCRS1
Annotation TypeOrtholog
Chromosome Positionchr5:5279884-5282898 | Forward length=720
E-Value8.2E-245
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9060845699023
Replicate 24.1657107350578
Replicate 34.7582570772301
Condition 2: 8 Hour
Replicate 13.5212695263682
Replicate 24.8532939282467
Replicate 35.9216306284884
Condition 3: 24 Hour
Replicate 15.166270867486
Replicate 23.2598318733077
Replicate 35.0420411595649


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_125564.p1 GENE.R_Transcript_125564~~R_Transcript_125564.p1 ORF type:complete len:751 (+),score=181.94,CRS1_YhbY|PF01985.17|4.8e-19,CRS1_YhbY|PF01985.17|2.8e-16,CRS1_YhbY|PF01985.17|7.4e-21 R_Transcript_125564:194-2446(+)
ATGACTGTAACTCTCTTTCTCTCCTCTCCACAATTTCCCCTCTTTTCAACCTCATCTTCAGTTTCTCTTGTCATCCTTAAAAACCCAAAACCTCTTCATTCTCTTTCCTCAAATGCCACTTCTTTCTTCCTCCAAAATCAATGCTTTCCCCTGACAAACAACAAGGACAAACACAAGCAAAATAGCAATGAAAATGAAGGTGATGTTGAAGCTAACACAGACAGCTCTAAGATCAAAATGCCCACTGCCCCTTGGATGAAGGGCCCTTTGCTACTTGAACCCGATCAAGTTCTGAACCTCTCAAAACCAACACCCAAGAAAAGAACCGAACCCCATAAAGTGGACAGGTCACTCACTGAAAAGGTTAGTGGGAGGAGGGGCAACAAGGCTATGAAGAAAATAGTTCAGAGCATTGAAAAGCTTCATCTGGTTGATACCCAGAAAAATTGGGATGATACCCAGATAAAAAGATGTGATTTTGAAGGTGGGTTTTTGATGGGGAAGCTTGAGGTTGAGGATTCTCATGGTGGGGTCTCCAAATTTGGGCAAAAAATGCCTTGGGAGAGAGAGGAGAAGGTGGTTTTTAGGAGGTTGAAGAGAGAGAAAGTGGAAAGTGCTGCAGAATTGAGTCTTGATAAGGATTTGTTGATGAGATTGAGAGGAGAAGCTTCAAAGATGAGGAAATGGGTTAAGGTGAAGAAAGCTGGTGTTACTCAAACTGTTATTGATGAAGTTCATTCACTTTGGGCTAATAATGAGCTTGTTATGTTCAAGTTTGATATGCCCTTGTGTAGAAATATGGATAGAGCCCGCGAAATTGTTGAGATTAAAACGGGAGGAATAGTTGTATGGAGTAAAAAAGATAGCCTTGTTGCCTATAGAGGATGCAATTATCAAGTAAGGAGACGGGTTAAAAAGACTCATGCTGAGTTTTCTCATGGAGAACAGACGTCTGCCTTCATACCTAGTTACCAGAGATACCTAAGGATTCAGTCAAATGATGGCTCGCTATATGAGAAGGAAGCTGATAGATTAGTGGATGGTTTGGGGCCTCGATTTATTGACTGGTGGTACCCGAAGCCCTTACCTGTTGATGGAGACCTGCTTCCAGAGATAGTTCCTGGATTCAAGACTCCTTTTAGGCGTTGCCCACCTCTTGTTCGGCCACAACTTACAGATGATGAATTGACTTATCTCAGGAAACTTTCTCGGCCTTTACCAGTACACTTTGTCTTAGGGAGGAACTTCAAACTTCAAGGTCTTGCTGTTGCCATCTTAAAGTTGTGGGAGAGAACTATAATTGCCAAAATTGCGGTGAAGTGGGGAGTTCCAAACACCAACAATGAACTCATGGCTGATGAGCTTAAGCGTCTTACAGGAGGAGTTTTGTTGCTACGTAACAAGTTCTTCATCATTCTTTACAGAGGGAAAGATTTTTTACCTGGAAATGTTGCGAATATGGTGGTTGACAGAGAAGTGGAGCTCGCAAAGTGGCACCTCCATGAAGAAGATGCACGAGGTAAGGCAGCCGGGATTCTTAACGTGAATGCTGAAACAGCAACAGATACCAGTGTCGTTGGAACTTTTTCAGAATTTCAAAATATCCGAGCAATTTCTGGGAAATTAAGCCATAGTGAAGCTGAAATTAAGTTAGCAGCTGAGAAAGAAAGATTAGAGGGGGAACTCAGAAAGCAGGAGCACAAGCTTGCCATTCTCAAATTCAAAATTCGAAAGGCTGAAAGAGAGCTGTCAAAATTGAATTCTGCTTGGGAGCCTTCTGAGCAAGAGCCTGATCAAGAGTTGCTCACTGAAGAGGAGAGAGAAGGTCTTAGGAAGATAGGTCTGAAGATGGACCGGGTTCTAGTGCTAGGGAGGCGAGGGGTCTTTGATGGAGTGATAGAAGGCCTGCACCAGCACTGGAAGCACAGAGAACTAGTCAAGGTTATCACAATGCAGAAAAGATTTATACAGGTTGTTGATACTGCTAAATTGCTGGAAAGAGAGACTGGTGGGTTACTATTATCGATCGACCCGCTAAAAAGTGGCCATGCTATAATTATATATCGGGGGAAAAACTACAAGCGTCCTGTAGATTTTGGTGGAAATCTCCTTGATAAAGGGAAAGCATTAAAAAGATCTCTTGAAATGCAGAGAGTTGGATCCCTCAAGTTTTTTGCATATCAAAGAGGAAAGGAGATTGCAGATTTGAGGCTCAAATTGGTTGAGTTGGAGAAGCAGAGTACTGGAAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_125564.p1 GENE.R_Transcript_125564~~R_Transcript_125564.p1 ORF type:complete len:751 (+),score=181.94,CRS1_YhbY|PF01985.17|4.8e-19,CRS1_YhbY|PF01985.17|2.8e-16,CRS1_YhbY|PF01985.17|7.4e-21 R_Transcript_125564:194-2446(+)
MTVTLFLSSPQFPLFSTSSSVSLVILKNPKPLHSLSSNATSFFLQNQCFPLTNNKDKHKQNSNENEGDVEANTDSSKIKMPTAPWMKGPLLLEPDQVLNLSKPTPKKRTEPHKVDRSLTEKVSGRRGNKAMKKIVQSIEKLHLVDTQKNWDDTQIKRCDFEGGFLMGKLEVEDSHGGVSKFGQKMPWEREEKVVFRRLKREKVESAAELSLDKDLLMRLRGEASKMRKWVKVKKAGVTQTVIDEVHSLWANNELVMFKFDMPLCRNMDRAREIVEIKTGGIVVWSKKDSLVAYRGCNYQVRRRVKKTHAEFSHGEQTSAFIPSYQRYLRIQSNDGSLYEKEADRLVDGLGPRFIDWWYPKPLPVDGDLLPEIVPGFKTPFRRCPPLVRPQLTDDELTYLRKLSRPLPVHFVLGRNFKLQGLAVAILKLWERTIIAKIAVKWGVPNTNNELMADELKRLTGGVLLLRNKFFIILYRGKDFLPGNVANMVVDREVELAKWHLHEEDARGKAAGILNVNAETATDTSVVGTFSEFQNIRAISGKLSHSEAEIKLAAEKERLEGELRKQEHKLAILKFKIRKAERELSKLNSAWEPSEQEPDQELLTEEEREGLRKIGLKMDRVLVLGRRGVFDGVIEGLHQHWKHRELVKVITMQKRFIQVVDTAKLLERETGGLLLSIDPLKSGHAIIIYRGKNYKRPVDFGGNLLDKGKALKRSLEMQRVGSLKFFAYQRGKEIADLRLKLVELEKQSTGK*

Click here to download the sequence:
Link to NCBI Protein BLAST