Transcript Information: R_Transcript_125577.p1


Annotated TAIR IDAT5G10720.1
Annotated Gene Namehistidine kinase 5
Annotated Gene Symbol(s)AHK5, CKI2, HK5
Annotation TypeOrtholog
Chromosome Positionchr5:3386835-3390541 | Forward length=922
E-Value2.6E-225
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.724529664345
Replicate 28.4510656524411
Replicate 39.8888314544391
Condition 2: 8 Hour
Replicate 18.0172696490459
Replicate 27.1349633403574
Replicate 39.8045196051725
Condition 3: 24 Hour
Replicate 18.9533054256114
Replicate 28.808304645559
Replicate 39.3119744653327


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_125577.p1 GENE.R_Transcript_125577~~R_Transcript_125577.p1 ORF type:complete len:959 (+),score=222.04,Response_reg|PF00072.20|4.1e+03,Response_reg|PF00072.20|3.3e-14,Response_reg|PF00072.20|8.5e-05,HATPase_c|PF02518.22|3e-20,HisKA|PF00512.21|1.1e+03,HisKA|PF00512.21|1.5e+03,HisKA|PF00512.21|1.9e+03,HisKA|PF00512.21|3.6e-18,HisKA|PF00512.21|6.3e+03 R_Transcript_125577:400-3276(+)
ATGGAGGATCCAATTGATCAAGATAATATGGAGGTAGAAGAAGTATTGACATCCATGTGGCCAGAAGATGTGAACATAGATGGAAGTCAATTTAATGTAGACAGACCAAGGGAAGATCAAGACATGTTAAAAGAAGTTGCAATTACTAATTCTGAGCCTTCTGAGATTGATATGGATTATCTTCATGACATGACTAGCGATAGTGACAAGGGTTCTTCTCAACTTTCTCATCTTGTTAAGCATTGGGAGTATCGGCAAGCTAACGCTGTTCGTCTTCTAAGAGAAGAGCTTGATAGACTTAGTAAACAAAGACAAGAAGTTGAGGTCAAGAGGTTGAAGATTTTGGAGGAATACCGGTTCGAGGAAGAAAGGGTTGGGAGTGAAGGGTTTCCTAATGATTATGTAGAGAAGTTGTATGGTCTCAATAAGGTTGCTCCTAAGAAGCAGCATGATATTCCTGTTGAGAGTAAAGGGTTTGAGATTGATGCCGAGTTTGATACTGTTAAGTATTGGAAAGAAAAGGCTATGATCTTGGAGAAATTGTTGGGGGAAAGTAGGCAAAGAGAGCAGATTTTGTTGGAGAAGTTGGAGGAGAGTATTAACAATATGGAGAAACAGTCATCACCTGTTGAAGAGTTGTCTCAGATGCTTAGAAGGGCTGATAACTTCATTCACTTTATTCTTCAGAATGCACCTATTGTTCTTGGTCACATGGATAGAGAGTTGCGGTACCGTTTTATCTACAATCACTACCCAAGCTTTAAAGAGGAGGACATTATAGGAAAAACAGATACGGAGATCTTTTCTGGTGCTGGAGTGAAGGAGTCTCTAGATTTCAAGCGTGAAGTCTTGGAACGTGGATTGCCTGGGAAGAGGGAAATAACATTTGATACTGAGCTATTTGGGTCCAAAACATTTTTGATATATGTGGAGCCTGTGTTTAGCAAGGCAGGAGAGACCATTGGAGTCAATTACATTGGAATGGATATCACAGATCAGGTACGGAAAAGGGAAAAAATGGCAAAGCTGCGAGAAGAAATTGCAGTGCAGAAAGCTATGGAGACAGAAATGAATAAGACAATACATATTACAGAGGAAACCATGCGAGCTAAACAAATGCTAGCTACCATGTCTCATGAAATAAGGTCTCCTTTGTCTGGGGTTGTTGGCATGGCTGAGCTTCTTGCCACCACTAAACTGGAGAAGCAACAACAACAATTATTGGATGTCATGAAATCTTCAGGAGATCATGTCCTTCAGCTTATCAATGACATCCTTGACCTGTCCAAGGTTGAATCAGGTGTTATGAGGCTAGAAGCTACAAAATTCCGGCCAAGGGAGGTCGTGAGGCATGTTCTTCAGACTGCTGCTGCATCTTTGAGGAAAATGCTAACATTGGAAGGACATATAGCAGACGATGTTCCTATAGAGGTTATTGGAGATGTCCTAAGGATTCGACAAATTCTGACTAACCTGGTCAGCAACGCCATCAAATTTACACATAAAGGGAAAGTTGGTATAAGGCTTTTTGTTGTACCAGCACCATATTCTGGAGATGAAGATCATAAATCTGAAAAAGCTCATAGTGGCTCCAAGGAAAAGAATAATTCTGGTCCAAGACATGTGGAAGCACCCTATGATAACTTCAGTGAGCCTCAAACATCGGATAGGGTTGGCGAATCAATGTCTAATGAAGAAGAGAGGCATGCCAGTTCGACTCCAACAACAGTGTGGATACAATGTGATGTGTATGACACTGGCATAGGAATACCAGAGCATGCTTTGCCCACATTATTTAAAAAATATATGCAAGCCAGTGCTGATCATGCGCGGAAGTATGGTGGAACCGGATTAGGCCTAGCTATATGCAAACAACTGGCCGAGCTGATGGGCGGTCATATGACAGTATCTAGCAAAGAGAATTGTGGATCAACATTCACATTTGTGTTACCTTATAGAGTATCTCCAATATCTAACGATCAATCAGATGACCCTGATGAGCTTCCAGATGCTGCTGGTCAAGATACAGCAACTGATGATATAACAGCTGGATATTTTCAATTCCAGCCATTAGGTTCTCTGTTCACATCAAGTGGATATACCATGTTGTCGAACATCAATCAAATGCCAGAAAACGCTCATACATTCCCCCCTACTAATGCTACACCCAAAGAGATGGCGTTACTTGTGAATGCCTGCTCGGATGTGGATTTCGATCAGGCATTATCTAATAGTTCTTCGAAGAACGATAGTGGTTATGCTGATGCTGAGTTGACAAGTAGAAGCGATCAGAATACAGATGAAGGGAGCAGTCGAATATGGAGACTGCAGGTTGAAGGTGCGGTGGCGAATGGAGTGACAAACTCAAATGAACCTGGGCAGCCACCTCAGAATCCCATGTTCAACATCGACAGAAGTTTGCAGAGTTGTGCAAAACCGAAAATCCTTCTTGTGGAAGACAACAAGATTAACGTGATGGTGACTAAGAACATGATGGAAAAATTGGGCCACAGTATAGACATAGTGAACAATGGCGTTGAAGCTGTTCATGCAGTTCACCGTCGAAGATATGACCTTATTTTAATGGATGTATGCATGCCAGTGATGGATGGACTTCAGGCTACAAGAATCATTCGTTCTTATGAGGATACTGGAAACTGGGATGCTGCCATAGAGGCTGGAATTGAGCTAACCACTTCATATACACCTATGGATTCTCCATATTCATCATCAAAGAGAATCCCTATTATTGCAATGACAGCAAATTCATTGTCAGAGAGTGCAGACGAGTGTATTGCAAACGGAATGGATTCGTTCATATCAAAGCCAGTAACATTTCAAAAACTAACTGCCTGCCTTCAGCAGTATCTACCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_125577.p1 GENE.R_Transcript_125577~~R_Transcript_125577.p1 ORF type:complete len:959 (+),score=222.04,Response_reg|PF00072.20|4.1e+03,Response_reg|PF00072.20|3.3e-14,Response_reg|PF00072.20|8.5e-05,HATPase_c|PF02518.22|3e-20,HisKA|PF00512.21|1.1e+03,HisKA|PF00512.21|1.5e+03,HisKA|PF00512.21|1.9e+03,HisKA|PF00512.21|3.6e-18,HisKA|PF00512.21|6.3e+03 R_Transcript_125577:400-3276(+)
MEDPIDQDNMEVEEVLTSMWPEDVNIDGSQFNVDRPREDQDMLKEVAITNSEPSEIDMDYLHDMTSDSDKGSSQLSHLVKHWEYRQANAVRLLREELDRLSKQRQEVEVKRLKILEEYRFEEERVGSEGFPNDYVEKLYGLNKVAPKKQHDIPVESKGFEIDAEFDTVKYWKEKAMILEKLLGESRQREQILLEKLEESINNMEKQSSPVEELSQMLRRADNFIHFILQNAPIVLGHMDRELRYRFIYNHYPSFKEEDIIGKTDTEIFSGAGVKESLDFKREVLERGLPGKREITFDTELFGSKTFLIYVEPVFSKAGETIGVNYIGMDITDQVRKREKMAKLREEIAVQKAMETEMNKTIHITEETMRAKQMLATMSHEIRSPLSGVVGMAELLATTKLEKQQQQLLDVMKSSGDHVLQLINDILDLSKVESGVMRLEATKFRPREVVRHVLQTAAASLRKMLTLEGHIADDVPIEVIGDVLRIRQILTNLVSNAIKFTHKGKVGIRLFVVPAPYSGDEDHKSEKAHSGSKEKNNSGPRHVEAPYDNFSEPQTSDRVGESMSNEEERHASSTPTTVWIQCDVYDTGIGIPEHALPTLFKKYMQASADHARKYGGTGLGLAICKQLAELMGGHMTVSSKENCGSTFTFVLPYRVSPISNDQSDDPDELPDAAGQDTATDDITAGYFQFQPLGSLFTSSGYTMLSNINQMPENAHTFPPTNATPKEMALLVNACSDVDFDQALSNSSSKNDSGYADAELTSRSDQNTDEGSSRIWRLQVEGAVANGVTNSNEPGQPPQNPMFNIDRSLQSCAKPKILLVEDNKINVMVTKNMMEKLGHSIDIVNNGVEAVHAVHRRRYDLILMDVCMPVMDGLQATRIIRSYEDTGNWDAAIEAGIELTTSYTPMDSPYSSSKRIPIIAMTANSLSESADECIANGMDSFISKPVTFQKLTACLQQYLP*

Click here to download the sequence:
Link to NCBI Protein BLAST