Transcript Information: R_Transcript_12558.p1


Annotated TAIR IDAT1G14610.1
Annotated Gene Namevalyl-tRNA synthetase / valine--tRNA ligase (VALRS)
Annotated Gene Symbol(s)TWN2, VALRS
Annotation TypeOrtholog
Chromosome Positionchr1:5008502-5014486 | Reverse length=1108
E-Value4.1E-251
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.699541167679
Replicate 25.9337370741712
Replicate 35.9304004448537
Condition 2: 8 Hour
Replicate 16.0004886431984
Replicate 25.8774649898768
Replicate 35.883130714908
Condition 3: 24 Hour
Replicate 18.0760665741726
Replicate 26.886819969785
Replicate 37.2238076733436


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12558.p1 GENE.R_Transcript_12558~~R_Transcript_12558.p1 ORF type:internal len:506 (+),score=107.85,tRNA-synt_1|PF00133.18|6.3e+03,tRNA-synt_1|PF00133.18|2.4e-105,tRNA-synt_1g|PF09334.7|2.6e-07,tRNA-synt_1g|PF09334.7|2.8e+02,tRNA-synt_1_2|PF13603.2|6.5e+03,tRNA-synt_1_2|PF13603.2|19,tRNA-synt_1_2|PF13603.2|1.5e-07 R_Transcript_12558:3-1517(+)
CCGACAAACCCAACCCATGATCACCTCTATTTTGGTATCACTTCTTGGATAAAACTGAGGCCCAAGAGAAAAGATCCAAAAGTTTCAAGGCAGTCCAGCGCAATTTATACTAGGCCACTATCAACAATTTCAGAAGAGAGTCAGAGGAGAGGTTTATCAGTGTCGCCGTCGCCGGTCACTAGAGGGGTTTGGCCGGAGAACCACAAAGTGTTACCGTACGTTTTTGGGCGTTTCGTTTTTCCGAGGGGTTTCAGGTGCGCGAAACGCCAGCTGTGCAACGTAACTAGTAATAGTCCTCAAACTATGGAAGATCTTGAGAGGAAGAAGAAGAAGGAAGAGAAGGCAAAAGAAAAAGAATTGAAGAAACAAAAGGCTGCACTCAAAGCAGAAGCTGCTAAACTTAAGGTTCAACAATCATCTAATGCCCCCAAAAAGAGTGAGAGGAAGAATGTAAAGAAAGATGCAGAGGAAGAGAACCCTAAGGATTATTTAGATCCTGAAACCCCCCTCGGTGAGAAGAAACAGCTTTCCCGTGTAATGGCAAAACAATATTCACCTGCTGCAGTGGAAAAATCATGGTATGCTTGGTGGGAAAACTCTGGATATTTCACCGCTGATCCTGATAGCTCAAAGCCGCCTTTTGTGATTGTGCTGCCACCTCCGAATGTGACTGGGGCTCTTCACATAGGTCATGCTCTTACTAGTTCAATAGAGGATACCATTATTCGCTGGCGAAGAATGTCTGGATACAATACCCTATGGGTTCCTGGAATGGACCATGCTGGGATAGCAACACAGGTTGTTGTTGAAAAGAAGATAATGCGGGAAAGGAATCTGACCAGGCATGATCTTGGCCGAGAAAAATTTGTGACCGAAGTGTGGAACTGGAAAAATGAGTTTGGTGGCAAAATATTGAAGCAGCAGCGTGAACTTGGTGCAACACTCGACTGGTCAAGAGAGTGTTTTACAATGGATGAGAAACGATCAAAGGCAGTAACCGAGGCATTTGTAAGGCTGTATAATGAAGGCCTCATTTATAGGGATCTTCGATTAGTGAACTGGGATTGTGTGCTAAGAACTGCCATATCTGATATCGAGGTCGACTATGAAGATGTAAAAGGAAGGACATTGTTAAAAGTTCCTGGATACAAAGACCCAGTAGAGTTTGGTGTTTTAACGTCATTTGCTTACCCATTAGAAGGAAACCTTGGTGAAATTGTTGTTGCCACTACTAGGGTAGAAACAATGCTTGGTGATACAGCAATCGCTGTACATCCAGATGACTCTAGGTACAAGCACTTGCATAACAAAGTGGCTGTCCATCCTTTTAATGGAAGAAAGATACCAATTATTTGTGATGCCATACTTGTTGATCCAACGTTTGGTACTGGTGCTGTTAAGATCACACCTGCCCATGATCCTAATGATTTTGAGGTTGGGAAGCGTCACAAGCTTGAGTTTATCAACATTTTTACAGATGATGGGAAAATAAATAGCAATGGTGGCCGAGATTTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12558.p1 GENE.R_Transcript_12558~~R_Transcript_12558.p1 ORF type:internal len:506 (+),score=107.85,tRNA-synt_1|PF00133.18|6.3e+03,tRNA-synt_1|PF00133.18|2.4e-105,tRNA-synt_1g|PF09334.7|2.6e-07,tRNA-synt_1g|PF09334.7|2.8e+02,tRNA-synt_1_2|PF13603.2|6.5e+03,tRNA-synt_1_2|PF13603.2|19,tRNA-synt_1_2|PF13603.2|1.5e-07 R_Transcript_12558:3-1517(+)
PTNPTHDHLYFGITSWIKLRPKRKDPKVSRQSSAIYTRPLSTISEESQRRGLSVSPSPVTRGVWPENHKVLPYVFGRFVFPRGFRCAKRQLCNVTSNSPQTMEDLERKKKKEEKAKEKELKKQKAALKAEAAKLKVQQSSNAPKKSERKNVKKDAEEENPKDYLDPETPLGEKKQLSRVMAKQYSPAAVEKSWYAWWENSGYFTADPDSSKPPFVIVLPPPNVTGALHIGHALTSSIEDTIIRWRRMSGYNTLWVPGMDHAGIATQVVVEKKIMRERNLTRHDLGREKFVTEVWNWKNEFGGKILKQQRELGATLDWSRECFTMDEKRSKAVTEAFVRLYNEGLIYRDLRLVNWDCVLRTAISDIEVDYEDVKGRTLLKVPGYKDPVEFGVLTSFAYPLEGNLGEIVVATTRVETMLGDTAIAVHPDDSRYKHLHNKVAVHPFNGRKIPIICDAILVDPTFGTGAVKITPAHDPNDFEVGKRHKLEFINIFTDDGKINSNGGRDF

Click here to download the sequence:
Link to NCBI Protein BLAST