Transcript Information: R_Transcript_12560.p1


Annotated TAIR IDAT5G53440.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21683679-21687970 | Reverse length=1181
E-Value3.4E-166
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.4031337953427
Replicate 23.9124640742006
Replicate 36.6441127597609
Condition 2: 8 Hour
Replicate 17.2879513713133
Replicate 26.9382837416158
Replicate 38.4636093364873
Condition 3: 24 Hour
Replicate 110.085175013182
Replicate 25.7462689689615
Replicate 38.5631492198317


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12560.p1 GENE.R_Transcript_12560~~R_Transcript_12560.p1 ORF type:3prime_partial len:1186 (+),score=343.27 R_Transcript_12560:540-4094(+)
ATGCCGAGAAGTTCGAGGCACAAATCTAGCAAGCATAGTTCAAGGGAAACGAGAGATTATTCTGATTCGGAGAAAGATTCTGGATTGAAAGACAAGAAAGGGAGAGGAGATGAAGGTGGCGGCGGCGGCGGTGGGAGTAGTATCAGTAGTAGCAGGCATTTCAAGGAATCATCTGCATCTGGTGAGAAGAGAAAGGTGGTTGAGTCGTCGAAATCATCGATTGATTTCGTTAAGGATTCGGGGAATGTAGAGTATATCGATGAGTATGCTCCTTCATCCTCTTCTAAGAAGAGGAAAGAGAAGGTTGATGATGATAGGTGGACTGGAGGGGATAACAATAATGAGCACGAGATGTCGAAAACTGATTTGCTGAAGAATTCGAGTGATTCAAAGAGGTCGAGTAGGAGAGATGAGGTGGTGGGGGTTGATGGGGAGGAAGGGAAGAGATCGAGTGGGAGTAAAGTGGATTCGAAGCATCATAGGTCGGAGAGGAAAGATAGGGGAGAGAAAGAAGGGATGTCGGAACGCGAGAGGAAGGGGGGGAGTAATAGCAGTAGTAAGAGTGAGAAATTGGTGATGGTGGTTGATGGTGTTTTGGCAAGTGAGAGTGAAGGAGGGAGTAAGAAACAAGGCGGCTCCGGTGAGGAGCGTGGGGGAAAGCATGCCGTTGGTAATACTGATCTTAATGTACAAGATGAATTTCGGAACCCTGAGTCAGAAAGAGAGCTTGATCGACGAGTCAGGAGGAAAAGAGATGGCTCAGGTGATGGGAACAAGCATCAGGATAGTGTTCGTGAACCTGATGACAGAAGAATCTCATCTAGGGATGATATTGCCAAGTCAGGACGGTATAAAGAAGACAATCATAAGGATGACAGAATTCGAGACAAACACCGAGAAGACGTGGACAAGGACAATTCACAACAGGATGAAAAGCAGAGGGACAGCCAGTCTTCGAGAGATTACGCTCGTGGGAGGTCTGCTGATAGGCAAGTGAGAAATGAGAAAAAGGAGCTTGATGTGTCACAGAAAAAGTCTAAGCTACATCACAGTGAATATGAGCGAGAGCGAGAGCGAGAGCGGGAGCGTGATCGAGACAGAGACCGAGACCGTGATCGTGGCCGTCATGACCATGTTCGTGATCGTGACAGAGAGCATGATGATCGGGACAATGATCTTGATCGTGACCGTGACCGTGACCTTGAACGTGGTTATGATCGAGACCGTGAACTTGATCGGGACAGGGAACGCGGCCGTGATCGCTACCGGCGTGAGCGTGACAGGGAACGGGTTCGTGATCGTGATCACAACCATGAACGGGGCCGAGACCGGGATTATGATCATGACCATGATTATGGCTCTCATGTGGATGAGAAAGGTTCTAGGTACAAGGAAGAAAGAGGTCGGAGAAGATCTCCGGATGGCTACGATGAGTATCACAGTGATAGAGCCAGAAGGATCGAGTCTGAGGTTGATAGAGACAGATCTTTATCTCGTAAAGCTCATGTGGACACTGTCACCAGTAGCAGTAGACGCAGGACCTCACCTAGCTCCAGGTCATACGTGGGCACTGATAAATATAGAGATGGAGTGCAAGATGAGATCAAGTATGGAGATTCTGTGAGGGATGGTACCAGTTTGTCTGAAGCAGTTGATAAAGTTCCCAAGTATCGATCAGGGGAGAAGCGTTCGAAGTTTGATGACAATCACATTGGAGAAATACCTGAAAGGTCCCCGAGTACGAAGGCATCGCCTGCAGGTTTTAAGGAAAGATCCCCTTCTACTACCAGTGTAGATTGTAGATTTAGATCTAGCAGGAGGAGGAGCCTTGATGTTGATGAGGCTGAGAGGAGGAGTTGTGGTTCGAATGACTTAAGAGATGGTCCTGTAACTGAGGACAGACAAGGTAGAGATTTTTCTGCAAAGAAGCCTTTGGCAGATGATTATTCTCAACCAGAATCACATTTTTACCATAAATCTAGTCAGGGTAATGTTTCTTCCCATGGTCCTGGTCCTGGTCCATCTGGCTTCAGGGCAGGTGCAGACAGTCCATCCTTCATTGGATCCATGGGAGAAGAAAGTAGAGGTCACTCTGGCAGCCGTTATAGGAGAAGTGCTGATCCGAAGATGGGAAGAGGTCCTGGGAATGCTTGGAAAGGTGTGCCCAATTGGCCTTCACCATTACCTAATGGTTTCATGCCCTTCCCTCCTGGGCCGCATCATGGGGGTTTTCCACCTATGATGTCACAATTTCCTCCTATTTTTGGTGTTAGGCCTTCTTTGGAAATGAACCATACTGGGATTCCGTATCATATGACTGATGCAGATCGTTTTCCTGGTCATGTACGGCCTATGGGATGGCAGAATATGGTAGATGGATCAGTTCCTCATTTTCATGGATGGGATGCAAATAATGGTGTCCTCAGGGATGAATCTTCCATGTATGGGCCTGGGCATCCATCAAGTGGTCGAGGAAGGGAATCAAATGCAGACATATGGAAGCCCAATGGTGATGTGATTACGGATGTTACTTCTGGGTCACAGAAAGATGCACCTATGGTTAAAGCGTCTACAGATGAAGCATCTTTTGCACAAGGTGCTTCAAGGCCTCATCATGACAGTAGTTGCTTTGATGACCATGGAACAAATATCAAGAAAAATACATCTAGTGGCCCATCATCCACAAAAGATGTTCCATTGACTCCAACTAAAGCGACTACTGAGAAAACTCCTGAGTCATTTAGTGTTGATGACACAACAAATTATTTGCGCACCTATCTTGCTAAGCTTGATATTTCAATAGATCTGGCTGATCCAGAGTTGTATAATCAGTGTATTAACATTGGTGTGAAGGGGCAGGCTGAGTATGCCGAAGACGATGTTGAACTTGACTATGTCAAGGAAAAAGAAGCTAATGAGTCAGAGGTCACAAATCTGACGATGGGCCTGGCAATATTCCCTGATCCAAAAGATTCTATCTTTCAGAGGGCAATGGAGCTGTACAAGACCCAGAGCACTGAAAGGAGATCATCTGTAACTGCAATGTTTAATGGGGAGATGTTGCAGCGTTCTCCAGCAGAGAAGCTGCATAGTCCTCTGGTTGAAGCACCTCAGCTGGAGGTAAAGCAAATCTTGGGTACTAATGAGCAATTAGATAGCTCTGTTGAGTGCGGTGTCCAACTGGAAGAACCAACTCTCGAGGTGGCAGATTCGGCTCCAATCACTGCTGAGGAGGAAGGGAAGAATACTGTACCCATAAACAGTGAAGAAGGGCCAACTAGTGTACCTTCTTTGGAGAGTATGGATCTGCCCTTGGATGTCGGGAATGAAAGCGAAATACCTGTTGTTAACGTGGAGGTGATGGAGGAAAAAATCTCCGGAGAAATGATGTCTGAGAACAATGATGATGATAAGGGTCAAAATGATTCTGTTGATACAAATGCTGACATAGATATTGTTGGTAGTGAGTGTAAGACTGGTGGTGCAGAGTCGGCTTCAAAGACTGGTGGTGCAGAGTCGGCTTCAAAGACTGGTGGTGCAGAGTCGGCTTCAAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12560.p1 GENE.R_Transcript_12560~~R_Transcript_12560.p1 ORF type:3prime_partial len:1186 (+),score=343.27 R_Transcript_12560:540-4094(+)
MPRSSRHKSSKHSSRETRDYSDSEKDSGLKDKKGRGDEGGGGGGGSSISSSRHFKESSASGEKRKVVESSKSSIDFVKDSGNVEYIDEYAPSSSSKKRKEKVDDDRWTGGDNNNEHEMSKTDLLKNSSDSKRSSRRDEVVGVDGEEGKRSSGSKVDSKHHRSERKDRGEKEGMSERERKGGSNSSSKSEKLVMVVDGVLASESEGGSKKQGGSGEERGGKHAVGNTDLNVQDEFRNPESERELDRRVRRKRDGSGDGNKHQDSVREPDDRRISSRDDIAKSGRYKEDNHKDDRIRDKHREDVDKDNSQQDEKQRDSQSSRDYARGRSADRQVRNEKKELDVSQKKSKLHHSEYERERERERERDRDRDRDRDRGRHDHVRDRDREHDDRDNDLDRDRDRDLERGYDRDRELDRDRERGRDRYRRERDRERVRDRDHNHERGRDRDYDHDHDYGSHVDEKGSRYKEERGRRRSPDGYDEYHSDRARRIESEVDRDRSLSRKAHVDTVTSSSRRRTSPSSRSYVGTDKYRDGVQDEIKYGDSVRDGTSLSEAVDKVPKYRSGEKRSKFDDNHIGEIPERSPSTKASPAGFKERSPSTTSVDCRFRSSRRRSLDVDEAERRSCGSNDLRDGPVTEDRQGRDFSAKKPLADDYSQPESHFYHKSSQGNVSSHGPGPGPSGFRAGADSPSFIGSMGEESRGHSGSRYRRSADPKMGRGPGNAWKGVPNWPSPLPNGFMPFPPGPHHGGFPPMMSQFPPIFGVRPSLEMNHTGIPYHMTDADRFPGHVRPMGWQNMVDGSVPHFHGWDANNGVLRDESSMYGPGHPSSGRGRESNADIWKPNGDVITDVTSGSQKDAPMVKASTDEASFAQGASRPHHDSSCFDDHGTNIKKNTSSGPSSTKDVPLTPTKATTEKTPESFSVDDTTNYLRTYLAKLDISIDLADPELYNQCINIGVKGQAEYAEDDVELDYVKEKEANESEVTNLTMGLAIFPDPKDSIFQRAMELYKTQSTERRSSVTAMFNGEMLQRSPAEKLHSPLVEAPQLEVKQILGTNEQLDSSVECGVQLEEPTLEVADSAPITAEEEGKNTVPINSEEGPTSVPSLESMDLPLDVGNESEIPVVNVEVMEEKISGEMMSENNDDDKGQNDSVDTNADIDIVGSECKTGGAESASKTGGAESASKTGGAESASK

Click here to download the sequence:
Link to NCBI Protein BLAST