Transcript Information: R_Transcript_125801.p1


Annotated TAIR IDAT5G67380.1
Annotated Gene Namecasein kinase alpha 1
Annotated Gene Symbol(s)CKA1, ATCKA1
Annotation TypeOrtholog
Chromosome Positionchr5:26881156-26883383 | Reverse length=409
E-Value3E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 186.757900834157
Replicate 283.207560909033
Replicate 390.495753466281
Condition 2: 8 Hour
Replicate 199.757227562851
Replicate 2116.08334338541
Replicate 3115.52043549147
Condition 3: 24 Hour
Replicate 194.240381521131
Replicate 293.939065645051
Replicate 390.117895223213


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_125801.p1 GENE.R_Transcript_125801~~R_Transcript_125801.p1 ORF type:5prime_partial len:162 (+),score=44.56,Pkinase|PF00069.21|1.9e-23 R_Transcript_125801:1-486(+)
CTTGCAGAGTTCTATCATCCTGGCAAGGAGTACAATGTTCGTGTGGCTTCAAGGTATTTCAAGGGGCCAGAACTTCTTGTTGATTTGCAAGACTATGACTATTCTTTAGACATGTGGAGCCTTGGTTGTATGTTCGCTGGAATGATATTCCGCAAAGAGCCTTTCTTTTATGGTCATGACAACCATGATCAGCTTGTAAAAATTGCAAAGGTTCTTGGGACTGATGAGTTGAATGCTTATCTGAACAAATATCATTTGGAGCTTGATCCTCAACTTGATGCTCTTGTTGGGAGGCACAGCAGGAAGCCATGGTCCAGATTTGTGAATTCAGATAACCAGCATTTAATTTCCCCAGAGGCTATTGATTTTCTTGATAAGCTCCTTCGCTATGATCATCAGGATAGGCTTACAGCAAAAGAAGCAATGGCACATCCTTACTTCTCTCAAGTCAGAGCCGCAGAGAGTAGCAGAATGCGGACACAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_125801.p1 GENE.R_Transcript_125801~~R_Transcript_125801.p1 ORF type:5prime_partial len:162 (+),score=44.56,Pkinase|PF00069.21|1.9e-23 R_Transcript_125801:1-486(+)
LAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSRFVNSDNQHLISPEAIDFLDKLLRYDHQDRLTAKEAMAHPYFSQVRAAESSRMRTQ*

Click here to download the sequence:
Link to NCBI Protein BLAST