Transcript Information: R_Transcript_125982.p1


Annotated TAIR IDAT5G02830.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:644458-648421 | Reverse length=852
E-Value5E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0874104398556
Replicate 20.71476767374632
Replicate 30.87727931219307
Condition 2: 8 Hour
Replicate 10.83356135990622
Replicate 20.57091613211538
Replicate 30.84964985882662
Condition 3: 24 Hour
Replicate 10.2930783901409
Replicate 21.03237382041
Replicate 31.2108091954454


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_125982.p1 GENE.R_Transcript_125982~~R_Transcript_125982.p1 ORF type:5prime_partial len:235 (+),score=52.08 R_Transcript_125982:3-707(+)
CACTGCCTCCTAAAAATCTCTCGTTTCACTTGTATCCTCTCTCCAGGGGGACTGACAATGAGCATCCTGGTTATCATCACAGGCTCTTCATCCTCCATTATCACTCACCACCAAAACCACAACCATCTCTTCAACCCCAAAAACGCTTCACTTTTCTCTCTCCACAACCCCATTTCTCTTTCTCTCTCAAAACCCACCTCTCCAACCCCACCTTGCTCTTCCTCCTCTCCACCACCTTCTATTCCTTCCTCTCCTTCTCTTCTAATTTCACCCTCAAATGGAGATGATGAAGCCATCATCAATGATCTCAGATACTATGCTGATATTGCCTCAATGCTTGTTAAAGATGGCCGCTTTGAGGGTTTTAGGATGGTTGTGGATACTGTATTGAGTTCTCATAAAAATGGGGTCTTGGAATTTGGGAAGTTGTTAAATTTGGAGCTTTTGATGGTGGGCATCTTTAAGGGGTTGAGAGAAAAAAGAATTAAGAGTGTTGTTGGATTGTTGGGCTGTTTTCCTCAATTGGGTATTGATGTTTTGGGGCTGTTTGATGATTCTGCTATGGAGTTGCTTAAGAAGGAGTATATTCACATTGTTAAGAGTGGGAATCTGGAGGTTGGAGTTCAGCTAATTGAAACATTGGCAGGATTCATAAGCCAAGCAATCACCATAATATTACAAGTATTCCACTGTCAGGCCAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_125982.p1 GENE.R_Transcript_125982~~R_Transcript_125982.p1 ORF type:5prime_partial len:235 (+),score=52.08 R_Transcript_125982:3-707(+)
HCLLKISRFTCILSPGGLTMSILVIITGSSSSIITHHQNHNHLFNPKNASLFSLHNPISLSLSKPTSPTPPCSSSSPPPSIPSSPSLLISPSNGDDEAIINDLRYYADIASMLVKDGRFEGFRMVVDTVLSSHKNGVLEFGKLLNLELLMVGIFKGLREKRIKSVVGLLGCFPQLGIDVLGLFDDSAMELLKKEYIHIVKSGNLEVGVQLIETLAGFISQAITIILQVFHCQAK*

Click here to download the sequence:
Link to NCBI Protein BLAST