Transcript Information: R_Transcript_125989.p1


Annotated TAIR IDAT5G02830.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:644458-648421 | Reverse length=852
E-Value2.3E-297
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2918634785389
Replicate 21.9175811940897
Replicate 32.3039146483992
Condition 2: 8 Hour
Replicate 12.6608916821284
Replicate 23.1796398456252
Replicate 32.9798019746762
Condition 3: 24 Hour
Replicate 12.8398674836582
Replicate 21.8868082750321
Replicate 33.4919112679674


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_125989.p1 GENE.R_Transcript_125989~~R_Transcript_125989.p1 ORF type:complete len:865 (+),score=164.03,PPR_2|PF13041.2|4.4,PPR_2|PF13041.2|2,PPR_2|PF13041.2|2.3e-06,PPR_2|PF13041.2|0.032,PPR_2|PF13041.2|2.1e-10,PPR_2|PF13041.2|1.6e-13,PPR_2|PF13041.2|0.0062,PPR_2|PF13041.2|2.7,PPR_2|PF13041.2|1.9e-05,PPR_2|PF13041.2|4.8e-09,PPR_2|PF13041.2|3.8e-14,PPR_2|PF13041.2|3.7,PPR_1|PF12854.3|99,PPR_1|PF12854.3|8.6e+03,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|0.00029,PPR_1|PF12854.3|0.34,PPR_1|PF12854.3|2.8e-10,PPR_1|PF12854.3|0.019,PPR_1|PF12854.3|7,PPR_1|PF12854.3|0.00016,PPR_1|PF12854.3|0.0014,PPR_1|PF12854.3|0.062,PPR_3|PF13812.2|5.8e+03,PPR_3|PF13812.2|3.8e+03,PPR_3|PF13812.2|1.6e+03,PPR_3|PF13812.2|7.9e+02,PPR_3|PF13812.2|0.00028,PPR_3|PF13812.2|0.52,PPR_3|PF13812.2|5.4e-06,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|88,PPR_3|PF13812.2|0.001,PPR_3|PF13812.2|1.7e-05,PPR_3|PF13812.2|0.029,PPR|PF01535.16|13,PPR|PF01535.16|31,PPR|PF01535.16|2.1e+02,PPR|PF01535.16|0.00061,PPR|PF01535.16|0.17,PPR|PF01535.16|3.1e-07,PPR|PF01535.16|0.16,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|3.5e-06,PPR|PF01535.16|0.00052,PPR|PF01535.16|65 R_Transcript_125989:65-2659(+)
ATGAGCAACCTGGTTATCATCACAGGCTCTTCATCCTCCATTATTACTCACCACCAAAACCATAATCATCTCTTCAACCCCAAAAACCCTTCACTTTTCTCTCTCCACAACCCCATTTCTCTTTCTCTCTCAAAACCCACCTCTCCAACCCCACCTTGCTCTTCCTCCTCTCCACCACCTTCTATTCCTTCCTCTCCTTCTCTTCTAATTTCACCCTCAAATGGAGATGATGAAGCCATCATCAATGATCTCAGATACTATGCTGATATTGCCTCAATGCTTGTTAAAGATGGCCGCTTTGAGGGTTTTAGGATGGTTGTGGATACTGTATTGAGTTCTCATAAAAATGGGGTCTTGGAATTTGGGAAGTTGTTAAATTTGGAGCTTTTGATGGTGGGCATCTTTAAGGGGTTGAGAGAAAAAAGAATTAAGAGTGTTGTTGGATTGTTGGGCTGTTTTCCTCAATTGGGTATTGATGTTTTGGGGCTGTTTGATGATTCTGCTATGGAGTTGCTTAAGAAGGAGTGTATTCAGATTGTTAAGAGTGGGAATTTGGAGGTTGGTGTTCAGCTAATTGAAACGTTGGCAGGTTTCCGATTTCCCATTAGAGAGCTGGTAAAGTCCAGTGAGATGATAAGAATATGCATCGACAAGCGCAGCCCTCTGTTGGCATTAAGGTATGTTTGTCTCCTTCCACATGCAGAGATATTAGTCTGTACAGTCATCAGGGAATTTGGAAAGAAAAAATATCTGGATTCTGCTTTGGAAGTCTTTGAAGCTTCCAAACAGAAGATGGTCGGCAACATGTATGTCTATCGCACAATAATTGATGTTTGTGGCCTTTGCGGTGATTGCTCCAAATCCAGGTTTATATATGAGGATTTATTGGTACAGAAAGTCACACCAAACATCTATGTTTTCAACAGTCTTATGAATGTGAATGCCCGTGACTTGAGTTACACAATGGAAGTGTATAAGCAGATGCAAAGTCTAGGTGTTGAAGCTGATATGACATCTTACAACATTCTCCTAAAGGCATGCTGTCTATCTGGAAGAGTTGACTTGGCTCAGGACATTTACAGGGAAGTCCAGCGCTTGCAGTCATCTGGGTCACTTAAACTGGATGTTTTTACTTACAGCACAATTATCAAGGTATTTGCTGATGGAAAATTGTGGCAACTGGCTATCAAAGTCAAAGAGGATATGTTATCAGCTGGTGTCAGCCCCAATACTGTTACTTGGTCTTCATTGATCAGTGCATGTGCAAATGCAGGTCTTGTAGATCAGGCAACTCAGCTGTTTGAGGAGATGCTTATTGCTGGGTGTGAACCTAATTCACAGTGTTTTAATACACTTCTTCATGCTTGTGTGGAGGCTTGCCAGTATGACCGAGCTTTTCGTCTTTTCAATACTTGGAAGAGTAGTGAATCTCAAAGCACTAGCCCTGAAGATCCCAAACACAGTAAAGATACACTTTCAAGTTTTCCACTCACAGAAGAAGATTGCAACACAAGTACACCATATTCCGCAACTGCATCCCGTCATTTGAGCTTTGCTAGGAGTATTCCATTTAAACCTACGACAACGACATACAATATACTTCTGAAGGCTTGTGGTGCTGATTTTTATCGGGCAAAAACTTTGATTGATGATATGAAAATGTTAGGTCTCTCTCCTAATCATATAAGCTGGTCAATTTTGATTGATATTTGTGGAAGAGGAGGAAATGTAGAGGGTGCTTTGCAGATATTGAAATCTATGGTTGAGTCAGGGATTAGACCTGATGTTGTTTCTTATACAACTGCCATAAAGGTTTGCGTGGAAAGTAAAAATCTGAAGACTGCATTTTCTTTATTTGCAGAAATGAAGAGACACCGTATAAAACCTAATTTGGTGACATATAACACTCTGTTAAGAGCGCGTAGTAGATATGGTTCCCTTCAAGAAATTCAACAATGCTTAGCTATATATCGGGACATGCGGAAAGCAGGCTACAAATCCAATGACTACTATCTTAAACTACTAGTTGAAGAATGGTGTGAAGGAGTACTACAGAAGAATGATCAGGATGGACAATCAAGTTCACGTCAAAGATCTGACATAGGGGGGCTACGAAGTCTGCTTCTTGAAAGAGTTGCAACACATTTGCAGAAGAGCACGAGTGAAAGCCTTGCGGTTGATATCCAGGGGCTTACAAAGGTAGAAGCTCGGCTTGTTGTTCTTGCAGCTTTACGAATGATTAAAGAAAATCACAATTCAGGACGTCCATTAAAAGATGATCTTGTAATTATACTGGGCATCACAAAGTTTGGTGTAGAGTGCATGGTAAAAGAAGCAATAACAAAGCTTTTGAAGAAGGAACTAGGGCTTGAAGTGAGCACAGTCAAACCAATCATTACAGCTGAGGCTAAAACAATTGATGCCGAAAACAGTCTTGATGATATAAGTTCAGCCTCAATGCATAGAACTGGCGAGCTATCTCCTGGATCTGACACCCTTACTCGGCGACCTGCTGTCTTGCAAAGACTATTGGTCTCGAAGAAGTCATTGTATCATTGGTTGCAACGACGATCTTTTGTTGCCAGTAAATGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_125989.p1 GENE.R_Transcript_125989~~R_Transcript_125989.p1 ORF type:complete len:865 (+),score=164.03,PPR_2|PF13041.2|4.4,PPR_2|PF13041.2|2,PPR_2|PF13041.2|2.3e-06,PPR_2|PF13041.2|0.032,PPR_2|PF13041.2|2.1e-10,PPR_2|PF13041.2|1.6e-13,PPR_2|PF13041.2|0.0062,PPR_2|PF13041.2|2.7,PPR_2|PF13041.2|1.9e-05,PPR_2|PF13041.2|4.8e-09,PPR_2|PF13041.2|3.8e-14,PPR_2|PF13041.2|3.7,PPR_1|PF12854.3|99,PPR_1|PF12854.3|8.6e+03,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|0.00029,PPR_1|PF12854.3|0.34,PPR_1|PF12854.3|2.8e-10,PPR_1|PF12854.3|0.019,PPR_1|PF12854.3|7,PPR_1|PF12854.3|0.00016,PPR_1|PF12854.3|0.0014,PPR_1|PF12854.3|0.062,PPR_3|PF13812.2|5.8e+03,PPR_3|PF13812.2|3.8e+03,PPR_3|PF13812.2|1.6e+03,PPR_3|PF13812.2|7.9e+02,PPR_3|PF13812.2|0.00028,PPR_3|PF13812.2|0.52,PPR_3|PF13812.2|5.4e-06,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|88,PPR_3|PF13812.2|0.001,PPR_3|PF13812.2|1.7e-05,PPR_3|PF13812.2|0.029,PPR|PF01535.16|13,PPR|PF01535.16|31,PPR|PF01535.16|2.1e+02,PPR|PF01535.16|0.00061,PPR|PF01535.16|0.17,PPR|PF01535.16|3.1e-07,PPR|PF01535.16|0.16,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|3.5e-06,PPR|PF01535.16|0.00052,PPR|PF01535.16|65 R_Transcript_125989:65-2659(+)
MSNLVIITGSSSSIITHHQNHNHLFNPKNPSLFSLHNPISLSLSKPTSPTPPCSSSSPPPSIPSSPSLLISPSNGDDEAIINDLRYYADIASMLVKDGRFEGFRMVVDTVLSSHKNGVLEFGKLLNLELLMVGIFKGLREKRIKSVVGLLGCFPQLGIDVLGLFDDSAMELLKKECIQIVKSGNLEVGVQLIETLAGFRFPIRELVKSSEMIRICIDKRSPLLALRYVCLLPHAEILVCTVIREFGKKKYLDSALEVFEASKQKMVGNMYVYRTIIDVCGLCGDCSKSRFIYEDLLVQKVTPNIYVFNSLMNVNARDLSYTMEVYKQMQSLGVEADMTSYNILLKACCLSGRVDLAQDIYREVQRLQSSGSLKLDVFTYSTIIKVFADGKLWQLAIKVKEDMLSAGVSPNTVTWSSLISACANAGLVDQATQLFEEMLIAGCEPNSQCFNTLLHACVEACQYDRAFRLFNTWKSSESQSTSPEDPKHSKDTLSSFPLTEEDCNTSTPYSATASRHLSFARSIPFKPTTTTYNILLKACGADFYRAKTLIDDMKMLGLSPNHISWSILIDICGRGGNVEGALQILKSMVESGIRPDVVSYTTAIKVCVESKNLKTAFSLFAEMKRHRIKPNLVTYNTLLRARSRYGSLQEIQQCLAIYRDMRKAGYKSNDYYLKLLVEEWCEGVLQKNDQDGQSSSRQRSDIGGLRSLLLERVATHLQKSTSESLAVDIQGLTKVEARLVVLAALRMIKENHNSGRPLKDDLVIILGITKFGVECMVKEAITKLLKKELGLEVSTVKPIITAEAKTIDAENSLDDISSASMHRTGELSPGSDTLTRRPAVLQRLLVSKKSLYHWLQRRSFVASKC*

Click here to download the sequence:
Link to NCBI Protein BLAST