Transcript Information: R_Transcript_125999.p1


Annotated TAIR IDAT5G14770.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4772881-4775697 | Reverse length=938
E-Value5E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20900336971052
Replicate 20.24041565362173
Replicate 30.87430296168521
Condition 2: 8 Hour
Replicate 10.65420249859052
Replicate 21.2802031588465
Replicate 31.3163381747609
Condition 3: 24 Hour
Replicate 11.3143782763953
Replicate 20.67344301955961
Replicate 30.41770428791789


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_125999.p1 GENE.R_Transcript_125999~~R_Transcript_125999.p1 ORF type:5prime_partial len:262 (+),score=37.50,PPR_2|PF13041.2|13,PPR_2|PF13041.2|0.0028,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|9.7e-10,PPR|PF01535.16|12,PPR|PF01535.16|4.9,PPR|PF01535.16|2.5,PPR|PF01535.16|6.6e+03,PPR|PF01535.16|0.00015,PPR|PF01535.16|5.3e+03,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|16,PPR_1|PF12854.3|7.9e+02,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|18,PPR_3|PF13812.2|6.7e+02,PPR_3|PF13812.2|0.31,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|29,PPR_3|PF13812.2|2.3 R_Transcript_125999:1-786(+)
AAACAATCCGACCCCAGTGCCCAAAAACGAGACAAAATATCAAGACTTCAGAGAGTCAAGATGGCCAGCAGCAGTGCAGCCCGGAACAGAAAAGTTCATTCACAAGTCTTCAACTTCAATTTACCTTCTCGGAACTTCATCACCAACTTTGTACTCCGTTTCTGCAAGTGCAACACAGGAAGGGTGGATGAAGCAATCAAGCTCCTAAAGTTTGGTCATCAGTTTGAGAATCCTGTCAGTGTTTCCACTTATGCAACCATAATGCGTGCCTTATTCAAAGCCAACAGGTCGAAGGATACCCTGGTTTTTTACTCGCAAATTTTGAGACGTGGTCTAGTTTTTGATGTGGAGATAAATTGCATTTTGATCCAATGCATGAGTTCCTTATGTCAAACAAACGATTGTATTTTCATTTTCAACCAGATGGTTAGTGAAGGTTTCTTCCCTGACAGTGAAACACTTGCTATCCTTTTGTCCCATTTAGCCAGACATTCTCAGTTACATGCAGTATGGACAGTAATAAATAAGCTTTATGAGGAAGATGAGGTTCTTGATCCAGCAGTATACAACTTGCTGATCAATGGTCTATGGAAAGAGGGTTACAAATCTGAGGCCAGTCGGCTGCTCGATACGATGTTGGAGAAGGGTTGGGTTCCAGATGCCCATACTCATGGAGTGCTGATTGGATCTCTCGGTAAGGCAGAAGAGCAAAAATTCAAACATGACAATGTGGTTATGACAGATGAAGTTAGCAGCATACTCTCAGAGGGGTTAGCAGAAACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_125999.p1 GENE.R_Transcript_125999~~R_Transcript_125999.p1 ORF type:5prime_partial len:262 (+),score=37.50,PPR_2|PF13041.2|13,PPR_2|PF13041.2|0.0028,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|9.7e-10,PPR|PF01535.16|12,PPR|PF01535.16|4.9,PPR|PF01535.16|2.5,PPR|PF01535.16|6.6e+03,PPR|PF01535.16|0.00015,PPR|PF01535.16|5.3e+03,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|16,PPR_1|PF12854.3|7.9e+02,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|18,PPR_3|PF13812.2|6.7e+02,PPR_3|PF13812.2|0.31,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|29,PPR_3|PF13812.2|2.3 R_Transcript_125999:1-786(+)
KQSDPSAQKRDKISRLQRVKMASSSAARNRKVHSQVFNFNLPSRNFITNFVLRFCKCNTGRVDEAIKLLKFGHQFENPVSVSTYATIMRALFKANRSKDTLVFYSQILRRGLVFDVEINCILIQCMSSLCQTNDCIFIFNQMVSEGFFPDSETLAILLSHLARHSQLHAVWTVINKLYEEDEVLDPAVYNLLINGLWKEGYKSEASRLLDTMLEKGWVPDAHTHGVLIGSLGKAEEQKFKHDNVVMTDEVSSILSEGLAET*

Click here to download the sequence:
Link to NCBI Protein BLAST