Transcript Information: R_Transcript_126296.p1


Annotated TAIR IDAT3G02060.1
Annotated Gene NameDEAD/DEAH box helicase, putative
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:354409-358319 | Forward length=823
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5536380897721
Replicate 21.1238895599965
Replicate 31.2540184815412
Condition 2: 8 Hour
Replicate 12.2936880789999
Replicate 23.2915653318533
Replicate 33.4889957153542
Condition 3: 24 Hour
Replicate 12.7929205873119
Replicate 21.3952231901582
Replicate 32.8225020642471


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_126296.p1 GENE.R_Transcript_126296~~R_Transcript_126296.p1 ORF type:complete len:822 (+),score=181.48,Helicase_C|PF00271.27|3.4e+02,Helicase_C|PF00271.27|8.3e-17,DEAD|PF00270.25|2.7e-16,DEAD|PF00270.25|2.4e+02,CarD_CdnL_TRCF|PF02559.12|4.3e-14,ResIII|PF04851.11|2.2e-08,ResIII|PF04851.11|60,TRCF|PF03461.11|1.2e-06 R_Transcript_126296:513-2978(+)
ATGGCTACTACCAAACTCCCAGTATCAGATTTCATCATCAAGTTCAAGTCTTTCCCACAAAGCTTGTCTCTTCTTTTCATATCCCCAAAATGCCCTTGTCACTTTAAGCACAAAAGACCCCAATTTCCAGCCTGCAAAGCAGTGTACACTGAAGGGGTTTCACCAGCCAAATTGGGTCAAGGAAAGGACCCTTTTTCTGATTGGGAAAGTGATCCAATTGCAATCTTGAATGAGAGGATCCACAAGGATCATGGGTCCCGAGATGGGTCGAAATCGAGTATGGATTCTGAGGAAGCTGATAAGTATATCAAGCTTGTGAAGGAGCAGCAGCAAAGAGGGTTGCAGAAGTTGAAGGGGAATGATGGGGCAGGAAAAGGTGGTGGTGGGATTATTAGTTATAAGGTGGATCCTTATACATTGAAAAATGGGGATTATGTGGCTCATAAGAAAGTGGGTATTGGGAGGTTTGTTGGGATTAAGTTTGATGTACCAAAAGATGGGTCTGAGCCTATTGAATATGTTTTTATTGAGTATGCTGATGGTATGGCTAAGCTTCCTGTAAAGCAGGCGTCTCGCATGCTCTACCGATATAATCTTCCAAACAAATCAAAAAGACCTCGAACACTTAGTAAATTAAGTGACCCGAGTGCATGGCAACGGAGGAGGACAAAAGGGAAGGTTGCTGTCCAGAAAATGGTAGTTGACTTGATGGAACTATATTTACATAGGCTAAAACAGAGAAGACCTCCATATCCAAAAAGTCCTGCAATGGGGGAATTTGCTGCTCAGTTTCCTTATGAACCCACGCCAGATCAGAAAAAGGCTTTTTCTGATGTTGAGAAGGATCTGACCGAGAGAGAAACTCCAATGGACAGACTGATATGTGGAGATGTTGGATTTGGCAAGACAGAAGTCGCATTACGTGCTATTTTTTGTGTTTTTTCTGCAGGAAAACAAGCTATGGTTCTTGCACCGACTATTGTATTAGCTAAACAGCATTTTGATGTTATTTCAGAGAGGTTTTCCAAGTATCCTAATATCAAGATTGGGCTTTTAAGCAGATTTCAGACCAAAGGAGAGAAAGAGGAATATTTACGCATGATTAAAAATGGTGAACTCGACATTATTGTGGGAACTCATTCACTTCTTGGAAATCGTGTTGTTTACAATAATTTGGGTCTCCTTGTGGTTGATGAAGAGCAGAGGTTTGGTGTCAAGCAAAAGGAGAAGATAGCTTCATTCAAAACTTCTGTTGATGTTCTCACACTTTCGGCAACACCAATACCACGAACACTTTATCTAGCTTTGACCGGGTTTCGTGATGCTAGTCTCATTTCTACACCTCCTCCAGAAAGAGTCCCTATTAAGACAAAGCTTTCAGCATTCAGTAAAGAAAAAGTTGTATCAGCAATTAAATTTGAACTGGACAGAGATGGTCAAGTATTTTATGTTCTCCCTCGTATAAAAGGACTTGAAGAAATTATGGGTTTTCTAGAACAATCCTTCCCAGATGTTGAAATAGCCATTGCTCATGGGAAGCAATACTCAAGACAGCTTGAGGATACAATGGAGAAGTTTGCACAAGGAGAGATAAAAATCCTTATTTGTACTAATATAGTGGAGAGTGGCTTGGATATTCAAAACGCAAACACCATTGTTATTCAGGATGTTCAGCAATTTGGACTTGCACAGTTATATCAGCTGCGAGGAAGGGTGGGGAGAGCAGATAAGGAAGCATATGCATACTTATTTTACCCTGATAAATCTCTGCTGTCTGATCAAGCACTGGAAAGACTCGCAGCACTTGAGGAGTGCCGTGACCTTGGCCAAGGCTTCCAGCTTGCTGAAAGAGACATGGGAATAAGAGGCTTCGGCAATATCTTTGGTGAGCAGCAAACGGGTGATGTAGGAAATGTGGGCATTGATCTGTTTTTTGAGATGCTTTTTGAGAGCTTGTCCAAGGTTGAAGAGCACCGTATAATATCCATTCCTTATCATGAAGTTCAGCTTGATATAAACATAAACCCTCATCTCCCTTCAGATTACATAAATTATCTGGATAATCCCATGGAATTATTAAATGAAGCTGAGAAGGCAGCAGAGAAAGATACCTCAAGTTTGGCACAATTTACAGAGAATTTGCGGCGCCAATATGGAAAAGAGCCTTACTCAATGGAGATTCTTTTAAAGAAGCTGTACGTAAAAAGAATGGCTGCAGACCTTGGTATTAACCGAATTTATACTACAGGAAAGATGGTTGCTATGGAAACAAACATGACCAAGAGTGTATTCAGACTCATACAAGACTCTATGGTTTCTGAAGTTCTGCGTAGTTCACTGATATTTGAAGAGGGACAAATAAAGGCTGAACTACTACTAGAACTGCCGAGGGAGCAACTCCTTAACTGGGTCTTTCAGTGTCTAGCAGAACTTCATGCTTCTTTGCCAACCCTCATCAAGTATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_126296.p1 GENE.R_Transcript_126296~~R_Transcript_126296.p1 ORF type:complete len:822 (+),score=181.48,Helicase_C|PF00271.27|3.4e+02,Helicase_C|PF00271.27|8.3e-17,DEAD|PF00270.25|2.7e-16,DEAD|PF00270.25|2.4e+02,CarD_CdnL_TRCF|PF02559.12|4.3e-14,ResIII|PF04851.11|2.2e-08,ResIII|PF04851.11|60,TRCF|PF03461.11|1.2e-06 R_Transcript_126296:513-2978(+)
MATTKLPVSDFIIKFKSFPQSLSLLFISPKCPCHFKHKRPQFPACKAVYTEGVSPAKLGQGKDPFSDWESDPIAILNERIHKDHGSRDGSKSSMDSEEADKYIKLVKEQQQRGLQKLKGNDGAGKGGGGIISYKVDPYTLKNGDYVAHKKVGIGRFVGIKFDVPKDGSEPIEYVFIEYADGMAKLPVKQASRMLYRYNLPNKSKRPRTLSKLSDPSAWQRRRTKGKVAVQKMVVDLMELYLHRLKQRRPPYPKSPAMGEFAAQFPYEPTPDQKKAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFCVFSAGKQAMVLAPTIVLAKQHFDVISERFSKYPNIKIGLLSRFQTKGEKEEYLRMIKNGELDIIVGTHSLLGNRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPIKTKLSAFSKEKVVSAIKFELDRDGQVFYVLPRIKGLEEIMGFLEQSFPDVEIAIAHGKQYSRQLEDTMEKFAQGEIKILICTNIVESGLDIQNANTIVIQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDQALERLAALEECRDLGQGFQLAERDMGIRGFGNIFGEQQTGDVGNVGIDLFFEMLFESLSKVEEHRIISIPYHEVQLDININPHLPSDYINYLDNPMELLNEAEKAAEKDTSSLAQFTENLRRQYGKEPYSMEILLKKLYVKRMAADLGINRIYTTGKMVAMETNMTKSVFRLIQDSMVSEVLRSSLIFEEGQIKAELLLELPREQLLNWVFQCLAELHASLPTLIKY*

Click here to download the sequence:
Link to NCBI Protein BLAST