Transcript Information: R_Transcript_126452.p1


Annotated TAIR IDAT1G08530.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09995.2); Has 140 Blast hits to 140 proteins in 53 species: Archae - 0; Bacteria - 63; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2701252-2702952 | Forward length=257
E-Value1.1E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.2380620238111
Replicate 26.6890868582896
Replicate 39.5275811240634
Condition 2: 8 Hour
Replicate 17.2590838560417
Replicate 28.7068920443555
Replicate 39.3970727548021
Condition 3: 24 Hour
Replicate 19.3456560395964
Replicate 28.6854780586787
Replicate 38.0384048186393


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_126452.p1 GENE.R_Transcript_126452~~R_Transcript_126452.p1 ORF type:5prime_partial len:226 (+),score=47.48 R_Transcript_126452:3-680(+)
TCTTTCAAATTTCGCTCTTTGAACACTTCAATCGAATCGAAAATTGCAAATTCAGTAACTGAAGCACAGCCTGTGCAACTTGATCGAAGCGATTCAGAGAATCAGTCGAATTTTGTGGAAATTCGAAACCCTAATGTCCCGCCTTTCATTTCTTCGTGGTCTCTCAAGTTCAGTCCTAGTGATCGCGCCTTTTTCATTTTGACATTCATCGCCTCTACGACTTGTGTGGCATTGGTTAGTTTTGTTGCTGCCGCTGTTCCCACATTGTATGCTATGGGAAGAGCTGCTAACTCTTTCGCGAAGCTATCAGATACTGCTCGAGAAGAGCTTCCTGGTACAATGGCTGCTATTAGACTTTCAGGCATGGAAATCAGTGATCTTACCGTAGAATTGAGTGACCTGAGCCAGGAGATATCAGAAGGCGTGAATAAGTCTGCCCAAGTTGTTCAAGCAGCAGAAGTTGGAGTTCGACAGATTGGTGCTCTTGCTCACAGACAGACTGCCTCACTGATTGAGGAGAGAGCGAACCTTCCTGTCATCTCTTTGCGTCCTGTAATCTCTGGTGCTGCAAAGAAGACTTCCCGTGCTGTTGGCTATGCCACAAGGAGCTTTCTAAATATAATATCTGGACGAGAGCCTATCTCAGAGAACAAAGCAGATGATTCGGTTGACACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_126452.p1 GENE.R_Transcript_126452~~R_Transcript_126452.p1 ORF type:5prime_partial len:226 (+),score=47.48 R_Transcript_126452:3-680(+)
SFKFRSLNTSIESKIANSVTEAQPVQLDRSDSENQSNFVEIRNPNVPPFISSWSLKFSPSDRAFFILTFIASTTCVALVSFVAAAVPTLYAMGRAANSFAKLSDTAREELPGTMAAIRLSGMEISDLTVELSDLSQEISEGVNKSAQVVQAAEVGVRQIGALAHRQTASLIEERANLPVISLRPVISGAAKKTSRAVGYATRSFLNIISGREPISENKADDSVDT*

Click here to download the sequence:
Link to NCBI Protein BLAST