Transcript Information: R_Transcript_126530.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8012790415841
Replicate 21.1050684429631
Replicate 31.8084266523278
Condition 2: 8 Hour
Replicate 10.80545608379096
Replicate 21.0297774532125
Replicate 31.5524403820068
Condition 3: 24 Hour
Replicate 12.2655730816813
Replicate 21.0157027120661
Replicate 33.0239592001634


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_126530.p1 GENE.R_Transcript_126530~~R_Transcript_126530.p1 ORF type:complete len:152 (+),score=11.22,RVT_1|PF00078.23|2.7e-25 R_Transcript_126530:1164-1619(+)
ATGCTTTTATGCCATGAGTTAGTAAAGGCTTATACTAGGAAACACATCTCTCCTAGATGCACCATCAAAGTTGATTTCCAAAAAGCCTATGACTCTCTTGAATGGCCTTTCTTATATCAAATCCTTGTGGAGTTGGAGTTTCCTATGAAAGTAATAAAGTGGATTATGAGCTACATCACTACAGTGTCTTATACACTGAATATTAATGGCAATTTGACAAAGCCTTTTGAGGCTAAGAGAGGCTTAAGGCAAGGGGATCCCTTTTCCCCATACTTATTTGTCCTGAGCATGGAATACCTACCCAGGTGCATGAATGAACTGCAAAACACACCTGATTTTAATTTTCACCCAAGGTGTCAGAAAATGGGCATTATCCATCTGTGCTTTGTAGATGACCTTATGTTATTCTGTGAGCTGACAGAATGTCTGTTACTCTGCTTCATCAAACCTTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_126530.p1 GENE.R_Transcript_126530~~R_Transcript_126530.p1 ORF type:complete len:152 (+),score=11.22,RVT_1|PF00078.23|2.7e-25 R_Transcript_126530:1164-1619(+)
MLLCHELVKAYTRKHISPRCTIKVDFQKAYDSLEWPFLYQILVELEFPMKVIKWIMSYITTVSYTLNINGNLTKPFEAKRGLRQGDPFSPYLFVLSMEYLPRCMNELQNTPDFNFHPRCQKMGIIHLCFVDDLMLFCELTECLLLCFIKPS*

Click here to download the sequence:
Link to NCBI Protein BLAST