Transcript Information: R_Transcript_126614.p1


Annotated TAIR IDAT5G48730.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19763152-19765136 | Forward length=508
E-Value3.6E-241
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1746691762458
Replicate 20.6971427872599
Replicate 31.3421916560246
Condition 2: 8 Hour
Replicate 11.3868946942776
Replicate 20.96081914161344
Replicate 32.517117878999
Condition 3: 24 Hour
Replicate 11.9729365586308
Replicate 21.5076837132231
Replicate 32.6077148162124


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_126614.p1 GENE.R_Transcript_126614~~R_Transcript_126614.p1 ORF type:complete len:512 (+),score=75.47,PPR_2|PF13041.2|40,PPR_2|PF13041.2|6.2e-05,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|0.00012,PPR_2|PF13041.2|6.8e-11,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|0.0012,PPR_2|PF13041.2|5.5e-12,PPR_2|PF13041.2|1e-10,PPR_2|PF13041.2|0.0022,PPR_3|PF13812.2|51,PPR_3|PF13812.2|3.3,PPR_3|PF13812.2|1.1e-05,PPR_3|PF13812.2|0.0017,PPR_3|PF13812.2|3e-05,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|0.0031,PPR_3|PF13812.2|1.1e-05,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|0.0015,PPR_3|PF13812.2|0.0071,PPR|PF01535.16|21,PPR|PF01535.16|0.069,PPR|PF01535.16|0.003,PPR|PF01535.16|0.32,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|0.32,PPR|PF01535.16|0.00072,PPR|PF01535.16|5.6e-06,PPR|PF01535.16|0.28,PPR|PF01535.16|0.0027,PPR|PF01535.16|5.3e-05,PPR_1|PF12854.3|7.3e+02,PPR_1|PF12854.3|8.1e+02,PPR_1|PF12854.3|0.015,PPR_1|PF12854.3|0.0059,PPR_1|PF12854.3|2.7e-08,PPR_1|PF12854.3|2.4e+02,PPR_1|PF12854.3|0.00046,PPR_1|PF12854.3|0.001,PPR_1|PF12854.3|0.021,PPR_1|PF12854.3|0.32,PPR_1|PF12854.3|3.8e-07,MRP-S27|PF10037.5|0.017,MRP-S27|PF10037.5|0.1,MRP-S27|PF10037.5|7.4 R_Transcript_126614:100-1635(+)
ATGACCATGACTTCTTCGCTCCCAGGACCCACCTTCCCCTTCCCACCAGCACTACTCAACCACCACCGCCACTTACCTTCACAGCCACCTCTCCGGACCAAACCCACTTCTTCACCTGACCCGAACCCGGACTCAGACCCAGACCGGGGCCCAACAACATCCATTGCAGTAAGAGGGACTGAAACTCAGAAGAAGAAACTGGCTGTGTTGAATGATAGTAGTAGCAATAAAGATAGAAAAGAAGAGGTAAACAGGAAAATAGCTTCACAGAAGGCCATTTCTGTCATTTTAAGAAGAGAGGCTACAAAGGCTGTGCTTGAGAAGAAGAAAGGGATTAGCTCTAAGAGACTTTTGCCCAGAACTGTCCTTGAATCCTTACATGAACGCATCACTGCTCTCCGTTGGGAGTCTGCTCTCAAGGTTTTTGAACTAATGCGCGAGCAGTTGTGGTATAGGCCCAACGCCAGTATATACATTAAGCTTATTGTGATGCTTGGAAAATGTAAACAACCCAAAAGGGCTCATGAACTATTTCAAGCTATGGTTGATGAAGGCTGTATTGTAGACCATGAAGCATACACCGCTTTGTTATCGGCCTACAGCAGAAGTTGTCACTTTGATCAAGCATTCGCTTTGCTTGACCATATGAAAAGCACGCCTGATTGCAGACCTGATGTTTTCACATACTCAATCCTCATAAAGTCATGCCTGCAAGTCCTTGACTTTGATAAAGTCCGTATACTGCTGACTGACATGGCCTCTCAGGGAATCAGGCCCAACACAGTCACATATAATACCCTCATTGATGCGTATGGGAAAGCAGGAAAGTTTGCAGAGATGGAGTCAACACTAGCAGAAATGCTCTGTAATCAGTATTGTGAACCCGATGTATGGACCATGAATTCCACTCTTCGAGCTTTTGGAAGCAATGGTCAAATTGAAATGATGGAGAAGTGTTACGAAAAATTTCAGGGTGCAGGAATTGAACCCAACATCAGAACCTTCAACATACTCCTCGATTCATATGGCAAAACTGGTAATTATGAAAAGATGAGTGCAGTGATGGAATACATGCAGAAATATCACTACTCGTGGACAATCGTGACCTATAATGTAGTGATAGATGCCTTTGGCAGAGCTGGAGATTTGAAGCAGATGGAGTACTTATTTAGGTTAATGCAATCAGAAAGGATAAAACCAGATTCTGTCACATTCTGCTCGCTTGTGAGGGCTTATGGCCGAGCTGGGAAAGCGGAGAAAATTGGAAGCGTTTTACGAATCATCAATAACACAGATGTGATGTTGGATACTGTGTTCTTCAACTGTCTGGTGGACGCATATGGGAGGATGCAACGGTTTGCAGAAATGAAAGAGGTTCTTGAGATGATGAATAGTAAAGGATGCAGGCCTGATAGTGTTACTTATAGAACAATGATGAAAGCTTATTCGAGTGCTGGAATGGTAAACCAGGCGAAAGAGTTGCGAGATCTTATGAAATCCTCGAAGGCATCTCTGTCTACGATGGAAGAAGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_126614.p1 GENE.R_Transcript_126614~~R_Transcript_126614.p1 ORF type:complete len:512 (+),score=75.47,PPR_2|PF13041.2|40,PPR_2|PF13041.2|6.2e-05,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|0.00012,PPR_2|PF13041.2|6.8e-11,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|0.0012,PPR_2|PF13041.2|5.5e-12,PPR_2|PF13041.2|1e-10,PPR_2|PF13041.2|0.0022,PPR_3|PF13812.2|51,PPR_3|PF13812.2|3.3,PPR_3|PF13812.2|1.1e-05,PPR_3|PF13812.2|0.0017,PPR_3|PF13812.2|3e-05,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|0.0031,PPR_3|PF13812.2|1.1e-05,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|0.0015,PPR_3|PF13812.2|0.0071,PPR|PF01535.16|21,PPR|PF01535.16|0.069,PPR|PF01535.16|0.003,PPR|PF01535.16|0.32,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|0.32,PPR|PF01535.16|0.00072,PPR|PF01535.16|5.6e-06,PPR|PF01535.16|0.28,PPR|PF01535.16|0.0027,PPR|PF01535.16|5.3e-05,PPR_1|PF12854.3|7.3e+02,PPR_1|PF12854.3|8.1e+02,PPR_1|PF12854.3|0.015,PPR_1|PF12854.3|0.0059,PPR_1|PF12854.3|2.7e-08,PPR_1|PF12854.3|2.4e+02,PPR_1|PF12854.3|0.00046,PPR_1|PF12854.3|0.001,PPR_1|PF12854.3|0.021,PPR_1|PF12854.3|0.32,PPR_1|PF12854.3|3.8e-07,MRP-S27|PF10037.5|0.017,MRP-S27|PF10037.5|0.1,MRP-S27|PF10037.5|7.4 R_Transcript_126614:100-1635(+)
MTMTSSLPGPTFPFPPALLNHHRHLPSQPPLRTKPTSSPDPNPDSDPDRGPTTSIAVRGTETQKKKLAVLNDSSSNKDRKEEVNRKIASQKAISVILRREATKAVLEKKKGISSKRLLPRTVLESLHERITALRWESALKVFELMREQLWYRPNASIYIKLIVMLGKCKQPKRAHELFQAMVDEGCIVDHEAYTALLSAYSRSCHFDQAFALLDHMKSTPDCRPDVFTYSILIKSCLQVLDFDKVRILLTDMASQGIRPNTVTYNTLIDAYGKAGKFAEMESTLAEMLCNQYCEPDVWTMNSTLRAFGSNGQIEMMEKCYEKFQGAGIEPNIRTFNILLDSYGKTGNYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIKPDSVTFCSLVRAYGRAGKAEKIGSVLRIINNTDVMLDTVFFNCLVDAYGRMQRFAEMKEVLEMMNSKGCRPDSVTYRTMMKAYSSAGMVNQAKELRDLMKSSKASLSTMEEA*

Click here to download the sequence:
Link to NCBI Protein BLAST