Transcript Information: R_Transcript_12663.p1


Annotated TAIR IDAT5G61060.2
Annotated Gene Namehistone deacetylase 5
Annotated Gene Symbol(s)HDA05
Annotation TypeOrtholog
Chromosome Positionchr5:24567137-24570917 | Reverse length=664
E-Value4.1e-315
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.749355999553
Replicate 25.9499901773189
Replicate 39.7200696624623
Condition 2: 8 Hour
Replicate 14.5774762364286
Replicate 24.5783407924089
Replicate 35.4131657784834
Condition 3: 24 Hour
Replicate 19.980174358631
Replicate 27.49355235303
Replicate 38.6056999139878


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12663.p1 GENE.R_Transcript_12663~~R_Transcript_12663.p1 ORF type:complete len:674 (+),score=124.80,Hist_deacetyl|PF00850.15|9.2e-90 R_Transcript_12663:40-2022(+)
ATGGAGGGAGAGGCGAAGTCAGAGAGAGTGACGAAACGTGTAGGGTTAGTGTACGACGAGAGGATGTGCAAGCATGATACTCCTGATGGCGATGAACATCCTGAATCTCCTCTTCGAATTAGGGCTATCGTTAAGAAGCTTCTCGATTCTGGCCTTCTTTCTAGGTGTGCTCTTTTGAATGCAAAAGAAGCAGAAGATAAATTTATAGAGTTAGTTCATTCGAAATATCATGTTGACTTGATTAAGAATATAAGCTCCAAGCAGTTTGATTCTCGTAGGGACAGAATTGCATCTAAATTTAATTCCATTTATTTGAACAAAGGCTCATCACAAGCTGCTTATCTGGCTGCGGGCTCTGTCCTAGAGGCTGCAGAGAGAGTTGCCAAGGGGGATCTTGATTCTGCTTTCGCAATTGTGAGGCCTCCTGGGCATCATGCGGAAGAGAATGAGCCAATGGGTTTTTGCTTATTCAATAATGTAGCTATCGCAGCTAGTTATCTGCTGAATGAAAGACCAGAATTGGGCATTCACAAAATTTTGATTGTTGATTGGGACGTTCATCATGGTAATGGTACTCAAAAAATGTTTTGGAAGGACTCTCGTGTTCTTTTCTTCTCTGTTCACAGGCACGAGTTTGGATGTTTTTATCCTGGAACTGATGATGGCTCCCATATTATGATTGGAGAAGGGCCAGGAGAAGGATACAATATTAACGTTCCTTGGGAACATGGCCGCTGTGGTGATCCAGACTATTTTGCAGTTTGGGATCATGTATTGATTCCCGTTGCTAAGGAGTTCAACCCAGACTTTATTATAGTCTCCGCAGGGTTTGATGCAGCTGTTCGTGACCCTCTCGGTGGTTGTTGTATTACTCCTTATGGATACTCTGTGATGTTAAGAAAGTTAATGGACTTTGCTCAAGGTAAAGTTTTGCTTGCTTTGGAAGGAGGATATAATCTTCAATCCCTGGCAAATTCAGCTCATGCATGTGTGCAAGTCTTGCTAGAAGAAAAACCAATTGATGGGTCTTCAGAAGCTTATCCATTTGAGTCGACGTGGCGTGTTATAAAAGATGTACGGCAAACATTGAGTACCCATTGGCCAAGCCTTTCGGATGAATTACCCAAGAAGTTGACCAGGCTTGAAGCACCTCCACCTCAGGTAATAGCCTCGAGCTCTGATTCTGAAACTGATGATACTGAGGATGCTTTAAAGAATATTATACAACCACTCTCAGAACTGAAGGTTGATGAGGGCCAAGGACAGAAGAGCAATTCAGCCATGTGGAGACCGGAGCTCAGACTGGTTGATGTGTGGTACGCGACCTTTGGTTCTAATATGTGGAAGCCAAGATTTCTCTGCTATATCCAAGGTGGACAGGTGGAAGGTATGCAAAAGTCTTGTTCTGGTTCCATGGATATAAGCCCACCAAAGGATGTCTTGTGGAAGAATATCCCTCATAGATTATTCTTTGGCTATGATTATACCCAAACGTGGGGTCCTGGAGGAGTTGCTTTCCTTCATCCTGAAAGTAAAGCACAGGATAAAGCTTACATCTGCATGTATAAAATTACGCTAGAGCAGTTTAATGATGTTCTATTTCAGGAGAACAGGTTAAGCTGTGACAGTAATTTTCCTCTGTTTGATTTAGAAGCTCTGAAAACCATCAATAGTACAGGATCAGTCTCTTTAAAAGCTGTTAAGGGCTGGTATCATAATGTAGTTTTTCTGGGCGAGGAGCAAGACATTCCCATCTTAACCATGACGTGTGACCTTTCCAATGTGGAGGGCTTCAGATCTGGACAACTACCATTGCGTGCTCCCGCCAAGGAATACGCGAATACCTTGATTAGGGGGCTTTCAGAAGGGGAACAGCTTTCTGAAGCTGAAGCAATGACCTATATTGAGGAAGCCGCGAAAACCCCTCTTTTAACTGTTTGTTTAAAGACTTTTTTTGGGGCAATCCATGACCAGGGGGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12663.p1 GENE.R_Transcript_12663~~R_Transcript_12663.p1 ORF type:complete len:674 (+),score=124.80,Hist_deacetyl|PF00850.15|9.2e-90 R_Transcript_12663:40-2022(+)
MEGEAKSERVTKRVGLVYDERMCKHDTPDGDEHPESPLRIRAIVKKLLDSGLLSRCALLNAKEAEDKFIELVHSKYHVDLIKNISSKQFDSRRDRIASKFNSIYLNKGSSQAAYLAAGSVLEAAERVAKGDLDSAFAIVRPPGHHAEENEPMGFCLFNNVAIAASYLLNERPELGIHKILIVDWDVHHGNGTQKMFWKDSRVLFFSVHRHEFGCFYPGTDDGSHIMIGEGPGEGYNINVPWEHGRCGDPDYFAVWDHVLIPVAKEFNPDFIIVSAGFDAAVRDPLGGCCITPYGYSVMLRKLMDFAQGKVLLALEGGYNLQSLANSAHACVQVLLEEKPIDGSSEAYPFESTWRVIKDVRQTLSTHWPSLSDELPKKLTRLEAPPPQVIASSSDSETDDTEDALKNIIQPLSELKVDEGQGQKSNSAMWRPELRLVDVWYATFGSNMWKPRFLCYIQGGQVEGMQKSCSGSMDISPPKDVLWKNIPHRLFFGYDYTQTWGPGGVAFLHPESKAQDKAYICMYKITLEQFNDVLFQENRLSCDSNFPLFDLEALKTINSTGSVSLKAVKGWYHNVVFLGEEQDIPILTMTCDLSNVEGFRSGQLPLRAPAKEYANTLIRGLSEGEQLSEAEAMTYIEEAAKTPLLTVCLKTFFGAIHDQGV*

Click here to download the sequence:
Link to NCBI Protein BLAST