Transcript Information: R_Transcript_12666.p1


Annotated TAIR IDAT5G61060.2
Annotated Gene Namehistone deacetylase 5
Annotated Gene Symbol(s)HDA05
Annotation TypeOrtholog
Chromosome Positionchr5:24567137-24570917 | Reverse length=664
E-Value1.5E-278
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.97886541397545
Replicate 20.49675789628465
Replicate 30.54195751410455
Condition 2: 8 Hour
Replicate 10.84966723791703
Replicate 20.98754683210283
Replicate 30.60123631392449
Condition 3: 24 Hour
Replicate 10.10863315722888
Replicate 20.27829979672653
Replicate 30.51784790268684


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12666.p1 GENE.R_Transcript_12666~~R_Transcript_12666.p1 ORF type:complete len:634 (+),score=115.40,Hist_deacetyl|PF00850.15|7.9e-90 R_Transcript_12666:40-1902(+)
ATGGAGGGAGAGGCGAAGTCAGAGAGAGTGACGAAACGTGTAGGGTTAGTGTACGACGAGAGGATGTGCAAGCATGATACTCCTGATGGCGATGAACATCCTGAATCTCCTCTTCGAATTAGGGCTATCGTTAAGAAGCTTCTCGATTCTGGCCTTCTTTCTAGGTGTGCTCTTTTGAATGCAAAAGAAGCAGAAGATAAATTTATAGAGTTAGTTCATTCGAAATATCATGTTGACTTGATTAAGAATATAAGCTCCAAGCAGTTTGATTCTCGTAGGGACAGAATTGCATCTAAATTTAATTCCATTTATTTGAACAAAGGCTCATCACAAGCTGCTTATCTGGCTGCGGGCTCTGTCCTAGAGGCTGCAGAGAGAGTTGCCAAGGGGGATCTTGATTCTGCTTTCGCAATTGTGAGGCCTCCTGGGCATCATGCGGAAGAGAATGAGCCAATGGGTTTTTGCTTATTCAATAATGTAGCTATCGCAGCTAGTTATCTGCTGAATGAAAGACCAGAATTGGGCATTCACAAAATTTTGATTGTTGATTGGGACGTTCATCATGGTAATGGTACTCAAAAAATGTTTTGGAAGGACTCTCGTGTTCTTTTCTTCTCTGTTCACAGGCACGAGTTTGGATGTTTTTATCCTGGAACTGATGATGGCTCCCATATTATGATTGGAGAAGGGCCAGGAGAAGGATACAATATTAACGTTCCTTGGGAACATGGCCGCTGTGGTGATCCAGACTATTTTGCAGTTTGGGATCATGTATTGATTCCCGTTGCTAAGGAGTTCAACCCAGACTTTATTATAGTCTCCGCAGGGTTTGATGCAGCTGTTCGTGACCCTCTCGGTGGTTGTTGTATTACTCCTTATGGATACTCTGTGATGTTAAGAAAGTTAATGGACTTTGCTCAAGGTAAAGTTTTGCTTGCTTTGGAAGGAGGATATAATCTTCAATCCCTGGCAAATTCAGCTCATGCATGTGTGCAAGTCTTGCTAGAAGAAAAACCAATTGATGGGTCTTCAGAAGCTTATCCATTTGAGTCGACGTGGCGTGTTATAAAAGATGTACGGCAAACATTGAGTACCCATTGGCCAAGCCTTTCGGATGAATTACCCAAGAAGTTGACCAGGCTTGAAGCACCTCCACCTCAGGTAATAGCCTCGAGCTCTGATTCTGAAACTGATGATACTGAGGATGCTTTAAAGAATATTATACAACCACTCTCAGAACTGAAGGTTGATGAGGGCCAAGGACAGAAGAGCAATTCAGCCATGTGGAGACCGGAGCTCAGACTGGTTGATGTGTGGTACGCGACCTTTGGTTCTAATATGTGGAAGCCAAGATTTCTCTGCTATATCCAAGGTGGACAGGTGGAAGGTATGCAAAAGTCTTGTTCTGGTTCCATGGATATAAGCCCACCAAAGGATGTCTTGTGGAAGAATATCCCTCATAGATTATTCTTTGGCTATGATTATACCCAAACGTGGGGTCCTGGAGGAGTTGCTTTCCTTCATCCTGAAAGTAAAGCACAGGATAAAGCTTACATCTGCATGTATAAAATTACGCTAGAGCAGTTTAATGATGTTCTATTTCAGGAGAACAGGTTAAGCTGTGACAGTAATTTTCCTCTGTTTGATTTAGAAGCTCTGAAAACCATCAATAGTACAGGATCAGTCTCTTTAAAAGCTGTTAAGGTAAGGGCACTAACTTTTAACGTGGACTATCGTTTCTTTGATAAGCATGAGACTAAAATTCAGTGTGGAAGACACGTGTCTCAGTGTCTCTTACAGCACAAGAAAAAAGGTATTGACCCTGGACTAGGAGTCCTTTTGATCATGTTGGCATTTTCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12666.p1 GENE.R_Transcript_12666~~R_Transcript_12666.p1 ORF type:complete len:634 (+),score=115.40,Hist_deacetyl|PF00850.15|7.9e-90 R_Transcript_12666:40-1902(+)
MEGEAKSERVTKRVGLVYDERMCKHDTPDGDEHPESPLRIRAIVKKLLDSGLLSRCALLNAKEAEDKFIELVHSKYHVDLIKNISSKQFDSRRDRIASKFNSIYLNKGSSQAAYLAAGSVLEAAERVAKGDLDSAFAIVRPPGHHAEENEPMGFCLFNNVAIAASYLLNERPELGIHKILIVDWDVHHGNGTQKMFWKDSRVLFFSVHRHEFGCFYPGTDDGSHIMIGEGPGEGYNINVPWEHGRCGDPDYFAVWDHVLIPVAKEFNPDFIIVSAGFDAAVRDPLGGCCITPYGYSVMLRKLMDFAQGKVLLALEGGYNLQSLANSAHACVQVLLEEKPIDGSSEAYPFESTWRVIKDVRQTLSTHWPSLSDELPKKLTRLEAPPPQVIASSSDSETDDTEDALKNIIQPLSELKVDEGQGQKSNSAMWRPELRLVDVWYATFGSNMWKPRFLCYIQGGQVEGMQKSCSGSMDISPPKDVLWKNIPHRLFFGYDYTQTWGPGGVAFLHPESKAQDKAYICMYKITLEQFNDVLFQENRLSCDSNFPLFDLEALKTINSTGSVSLKAVKVRALTFNVDYRFFDKHETKIQCGRHVSQCLLQHKKKGIDPGLGVLLIMLAFS*

Click here to download the sequence:
Link to NCBI Protein BLAST