Transcript Information: R_Transcript_126690.p1


Annotated TAIR IDAT2G28050.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:11938265-11939653 | Reverse length=462
E-Value3E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.156467960895
Replicate 20.75303187147061
Replicate 31.7880786731174
Condition 2: 8 Hour
Replicate 11.2397906302403
Replicate 21.9813439606114
Replicate 32.0679050073859
Condition 3: 24 Hour
Replicate 12.4217096231755
Replicate 22.140383774191
Replicate 32.4935359769883


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_126690.p1 GENE.R_Transcript_126690~~R_Transcript_126690.p1 ORF type:complete len:474 (+),score=81.65,PPR_2|PF13041.2|5.9e+02,PPR_2|PF13041.2|7.5e-06,PPR_2|PF13041.2|1.5e-05,PPR_2|PF13041.2|1.4e-10,PPR_2|PF13041.2|1.5e-07,PPR_2|PF13041.2|0.00037,PPR_2|PF13041.2|1.3e-06,PPR_2|PF13041.2|0.022,PPR|PF01535.16|2.6e+03,PPR|PF01535.16|0.033,PPR|PF01535.16|9.1,PPR|PF01535.16|0.00095,PPR|PF01535.16|6.5,PPR|PF01535.16|0.013,PPR|PF01535.16|0.00045,PPR|PF01535.16|0.015,PPR|PF01535.16|0.00053,PPR_1|PF12854.3|2.2e+02,PPR_1|PF12854.3|0.00088,PPR_1|PF12854.3|0.00058,PPR_1|PF12854.3|16,PPR_1|PF12854.3|0.0047,PPR_1|PF12854.3|0.051,PPR_1|PF12854.3|0.00025,PPR_3|PF13812.2|4.1e+03,PPR_3|PF13812.2|0.014,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|3.7e+02,PPR_3|PF13812.2|0.71,PPR_3|PF13812.2|4.3,PPR_3|PF13812.2|12 R_Transcript_126690:124-1545(+)
ATGACAGTCCAAGATTTCCTCAAAACTCTCAGAACTGCAAAAAATGCAGCACTACCATCATCAACAACCCAACTTTCTTCTTCCCTATACAACCAAACTACTACTACACAAACCCTCTCTAAAACCCTAATCTTCAACCCATCTTCTAATACCCAAAATGTAACATCTTTCCTTCAATCCCTCACTTCCTACAAATTCCAGTCATTTCTTTCTGACCCACATGTTTATACCTTTGATTGTTTAAGAATCTTCAATGCTGTACTTCGTTTACAACCTGAACTTCCCTTTAAGCCTGATCTTCATGCACATTTAACCCTCATTTGCAGGCTTATCAAGTCAAGGGACTTCTCAGCTGCCGAGATTCTGTTGAAAAATGCTGCCTTTCATAAAAATTACAGGTACCCATTTTCTGATTTTACTAGTTGGGTTGAGAATTATTGTCCTGAATCAAGAATTATTACCAAGTTGTTGAATATGTTGCTTAAGATGTATTCTGATCATAGAATGTTTGACATGGCTTGTACTACTTTTGATTATATGGTTGAGAAAGGGATTGAGAGGGATGAGAAAACTTGTTCTGTTCATTTATATGCCATGATTACTTGTGATAAGATTGATTTAGCTTTCGAGTTTTTTCATCGAATGTTGGGGTCAGGGATGGAGGTTTCTGTGTATTCAGTGACTATTGTGGTGAGTGGGTTGTGCAAAGTTGGGGAGTTAAAGATGGGGAGAGAATTGGTGGAGGATATGTCTAGGAAAGGGGTTAAACCCAATATTATAACATTTAATACTTTAGTGGATGGGTGTGTGAGAAGGTGGAGTGTTACTGAGCTAGATCATGTTTTGTGTTTGGTGGAACGAGAATGCGTTCAGTTTAATGATACGACTTATAAGCTTCTAATTGAGGGCTATTCTGGTTGTGAAAAGATCGAAGAAACGGAGAAGTTGCTTATGGAGATGTATGACAAAGGCATTGAGGCTGAGATTTATTTGTTTCATATAGTTATTAGAGGGTATTGTCGGTTGGGAAACATAAGCAGTGGGCTTGCGGTATTCAGAAACATGCAAGAGAGGGAGCTTAACCCAAGTGTTGATATTTGTTGGTGTTTGATCAATGGTCTGTGTGAGGCTGGAGAGATCAGTCTTGTGAAGAACTTGGTGGAGGAGATGCAATGCAAGGGCGGTGAGCCGGATGATGTTATGTGTAATACCCTGATTGATGTGTATAGCAGGAATGGTATGATGGATGAAGTTGCGGAATTACAGCGTATGAGGATGATGAAATGTTCGGCTGTAGACCCATCTTTCATGAACTCCATGGATTCAGAGTCCGAAATTGAATTGGCGACAGATTCAGAGTCTGAAATTGAGTTGGTGATGGTTGAGGACACAAAGCCTATGATACTGGATGACTTGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_126690.p1 GENE.R_Transcript_126690~~R_Transcript_126690.p1 ORF type:complete len:474 (+),score=81.65,PPR_2|PF13041.2|5.9e+02,PPR_2|PF13041.2|7.5e-06,PPR_2|PF13041.2|1.5e-05,PPR_2|PF13041.2|1.4e-10,PPR_2|PF13041.2|1.5e-07,PPR_2|PF13041.2|0.00037,PPR_2|PF13041.2|1.3e-06,PPR_2|PF13041.2|0.022,PPR|PF01535.16|2.6e+03,PPR|PF01535.16|0.033,PPR|PF01535.16|9.1,PPR|PF01535.16|0.00095,PPR|PF01535.16|6.5,PPR|PF01535.16|0.013,PPR|PF01535.16|0.00045,PPR|PF01535.16|0.015,PPR|PF01535.16|0.00053,PPR_1|PF12854.3|2.2e+02,PPR_1|PF12854.3|0.00088,PPR_1|PF12854.3|0.00058,PPR_1|PF12854.3|16,PPR_1|PF12854.3|0.0047,PPR_1|PF12854.3|0.051,PPR_1|PF12854.3|0.00025,PPR_3|PF13812.2|4.1e+03,PPR_3|PF13812.2|0.014,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|3.7e+02,PPR_3|PF13812.2|0.71,PPR_3|PF13812.2|4.3,PPR_3|PF13812.2|12 R_Transcript_126690:124-1545(+)
MTVQDFLKTLRTAKNAALPSSTTQLSSSLYNQTTTTQTLSKTLIFNPSSNTQNVTSFLQSLTSYKFQSFLSDPHVYTFDCLRIFNAVLRLQPELPFKPDLHAHLTLICRLIKSRDFSAAEILLKNAAFHKNYRYPFSDFTSWVENYCPESRIITKLLNMLLKMYSDHRMFDMACTTFDYMVEKGIERDEKTCSVHLYAMITCDKIDLAFEFFHRMLGSGMEVSVYSVTIVVSGLCKVGELKMGRELVEDMSRKGVKPNIITFNTLVDGCVRRWSVTELDHVLCLVERECVQFNDTTYKLLIEGYSGCEKIEETEKLLMEMYDKGIEAEIYLFHIVIRGYCRLGNISSGLAVFRNMQERELNPSVDICWCLINGLCEAGEISLVKNLVEEMQCKGGEPDDVMCNTLIDVYSRNGMMDEVAELQRMRMMKCSAVDPSFMNSMDSESEIELATDSESEIELVMVEDTKPMILDDLK*

Click here to download the sequence:
Link to NCBI Protein BLAST