Transcript Information: R_Transcript_126949.p1


Annotated TAIR IDAT5G49430.1
Annotated Gene NameWD40/YVTN repeat-like-containing domain;Bromodomain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20037338-20045454 | Reverse length=1677
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6308130945137
Replicate 21.3727150346465
Replicate 31.8720216460451
Condition 2: 8 Hour
Replicate 11.7100083989904
Replicate 21.7609609770919
Replicate 33.9377936858492
Condition 3: 24 Hour
Replicate 13.2065882309126
Replicate 22.2612375385584
Replicate 32.8619881314219


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_126949.p1 GENE.R_Transcript_126949~~R_Transcript_126949.p1 ORF type:3prime_partial len:673 (+),score=139.22,WD40|PF00400.28|1.3e-06,WD40|PF00400.28|8.1e-06,WD40|PF00400.28|1.5e-05,WD40|PF00400.28|1.3,WD40|PF00400.28|5.4,WD40|PF00400.28|1.3e+02,WD40|PF00400.28|0.035 R_Transcript_126949:505-2520(+)
ATGCTCAAAAAAGGGGTTATGGCTCTTGAAAAGCAGGCTTCTTCGAGTCATCGGACTGTTAATGTGAAGCCATTGACTTTCCCCTGTAAGGTCATGGGGAAAGCTGAATTTGCTGATCCTGCAATGAATCCTGATGTTGAGGGCCTTGAGGCTGATGTGGATGTTGATTGTAGAGAGCTTTATTTTCTAATTATGCATTTCTTGTCTGCTGGACCATGTCAAAGAACTTGTGGACAATTTTGGAATGAGCTTCTTGAACACGACCTCTTACCTAGAAGATATCATGCTTGGTATTCGAGGAGTGGTGCTCCTAGTAGTGATGAGAATGATGATGGCTTGTCTTTTCCATTGAGTTACAATAAAGTAGCGGAGAGGTATCCTCATATTCAAAAGGATCACTTAGTAAAGCTTCTGAAGCAACTCTTACTCAATAAAGTCCATCCTCAGCAAGGTGTGGTTGCTAAAAACGTTCCTAATGCAGCTGATGTTCCTACACTTTTGGGCACAGGATCCTTTTCACTTTTGGGCTATGATGAAAATAAAGGATTCAATGAGGACAAACCACCTGAATTTATGCGTTGGCCTCATATGCATGCTGATCAGGTACGTGGGCTAAGGTTGAGGGAAATTGGTGGTGGATTTGCTAGACATCATCGAGCACCATCTACTCGTGCAGCCTGTTATGCCATTGTAAAGCCATCAACTATGGTGCAAAAGATGCAGAACATTAAGAAGGTCAGGGGACACCGCAATTCTGTTTATTGTGCTACGCTTGATCGGTCAGGAAGATTTGTCATTACTGGTTCAGATGACCGCCTTGTAAAAATTTGGTCCATGGAAACTGCCTTTTGCTTGGCCAGCTGCCGGGGACATGAAGGTGACATCACTGACTTGGCTGTGAGTTCCAACAATGCGTTAGTGGCATCTTCGTCAAATGATTGTATCATTAGAGTTTGGCGGTTGCCAGATGGCCAGCCAATTTCAGTTTTGCGTGGGCATACAGGAGCAGTTGCGGCCATCGCATTTAGTCCTAGACCTAGTGCCATATATCAGCTTCTGTCCTCATCAGATGATGGAACTTGTAGATTATGGGATGCAAGGTACTCCCAGTTCAAGCCACGGATTTATGTACCCAGGCCACCAGATTCTATAGCAGGAAAGAGCACCGCTCCTCCCAGTGCTGGTCAACAGAATTATCAGATATTTTGTTGTGCATTCAATGCTAGTGGAACTGTCTTTGTCACTGGCAGCTCAGATAATCTTGCCAGAGTATGGAATGCTTGTAAATCTGGCACAGATGATTCAGAACAACCTATCCATGAGATGGATGTTTTATCTGGCCATGAGAATGATGTTAATTATGTACAGTTCAGTGGTTGTGCTGTGACTTCTAGATTTTCTGCTGCTGATACAACAAAGGAGGAAAACTTCCCAAAATTCAAAAATTCATGGTTTGCTCATGATAACATAGTCACATGCTCTCGTGATGGAAGTGCAATCATCTGGATTCCACGGTCACGTAAATCACATGGGAAAGCTGGGCGTTGGACACGGGCATATCATCTCAAGGTTCCTCCTCCGCCAATGCCACCTCAGCCTCCTCGAGGGGGCCCGCGACAGAGAGTTCTTCCAACACCTCGTGGCGTTAATATGATTGTGTGGAGCCTAGATAACCGATTTGTCCTTGCTACCATCATGGATTGCAGAATATGTGTATGGAATGCTGCTGATGGTAGCTTGGTTCATTCTTTGACCGGTCATACTGAGTCTACATATGTGCTGGATGTCCATCCCTTCAACCCTCGCATAGCTATGAGTGCTGGCTATGATGGGAAAACCATAATTTGGGATATATGGGAAGGGAGGCCCATCAGGACTTATGAAACCGGACGTTTTAAACTGGTCGATGGGAAATTCTCACCGGATGGGACGTCAATTGTACTTTCAGATGATGTTGGACAACTTTATATCCTGAGCACAGGCCAAGGCGAGTCTCAAAAGGATGCAAAATATGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_126949.p1 GENE.R_Transcript_126949~~R_Transcript_126949.p1 ORF type:3prime_partial len:673 (+),score=139.22,WD40|PF00400.28|1.3e-06,WD40|PF00400.28|8.1e-06,WD40|PF00400.28|1.5e-05,WD40|PF00400.28|1.3,WD40|PF00400.28|5.4,WD40|PF00400.28|1.3e+02,WD40|PF00400.28|0.035 R_Transcript_126949:505-2520(+)
MLKKGVMALEKQASSSHRTVNVKPLTFPCKVMGKAEFADPAMNPDVEGLEADVDVDCRELYFLIMHFLSAGPCQRTCGQFWNELLEHDLLPRRYHAWYSRSGAPSSDENDDGLSFPLSYNKVAERYPHIQKDHLVKLLKQLLLNKVHPQQGVVAKNVPNAADVPTLLGTGSFSLLGYDENKGFNEDKPPEFMRWPHMHADQVRGLRLREIGGGFARHHRAPSTRAACYAIVKPSTMVQKMQNIKKVRGHRNSVYCATLDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNALVASSSNDCIIRVWRLPDGQPISVLRGHTGAVAAIAFSPRPSAIYQLLSSSDDGTCRLWDARYSQFKPRIYVPRPPDSIAGKSTAPPSAGQQNYQIFCCAFNASGTVFVTGSSDNLARVWNACKSGTDDSEQPIHEMDVLSGHENDVNYVQFSGCAVTSRFSAADTTKEENFPKFKNSWFAHDNIVTCSRDGSAIIWIPRSRKSHGKAGRWTRAYHLKVPPPPMPPQPPRGGPRQRVLPTPRGVNMIVWSLDNRFVLATIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIIWDIWEGRPIRTYETGRFKLVDGKFSPDGTSIVLSDDVGQLYILSTGQGESQKDAKYD

Click here to download the sequence:
Link to NCBI Protein BLAST