Transcript Information: R_Transcript_126975.p1


Annotated TAIR IDAT2G32590.1
Annotated Gene NameLOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits to 447 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other Eukaryotes - 108 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13829420-13833209 | Reverse length=671
E-Value2E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.116359187391
Replicate 22.2532615080905
Replicate 32.3092971235146
Condition 2: 8 Hour
Replicate 12.1499783856118
Replicate 21.8179578732671
Replicate 33.5417776820267
Condition 3: 24 Hour
Replicate 13.3970088743432
Replicate 21.7572482693306
Replicate 33.3810275532606


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_126975.p1 GENE.R_Transcript_126975~~R_Transcript_126975.p1 ORF type:3prime_partial len:615 (+),score=123.36,Cnd2|PF05786.10|2.8e-80,Cnd2|PF05786.10|1.4e-09 R_Transcript_126975:151-1992(+)
ATGACAGCGCGTGTAGTTCAGTCACCAAAGAGCCCGTTCTTCCTAGGCTCCAACGACGATCAAATGGAACGCGCCGCCGCACGTGCTGCACGCGCCGCCGCAGTCCGTCGTAATCCCGTCGAAATCGCTCCTGCTCAACAACAACCACCTCCTCGTCCTTCTCTGTCCTCGAACTCCTTTCTTACTCGCGACCAGATCATCGAGCTCTTCCGTAACTGCTACAAGCTCGCCTCTGAGAATAGGATAAACCAGAAGAATACGTGGGAGTTGAAGCTGATTGATCATATAAGTGAGATCATCAAAGTTGATGCTGAAGATCATAACCACGAGACCAACTTTCAAAAGGCTAGTTGTACGTTGGAAGCTGGAGTGAAGATTTATGCCGCGAGGGTGGATGCCTGGCATGCTGATGCGTACAGAGTCCTTAGTACAATCAGTGGAGCTGGTTTTCAAGATGATCAAGGAATCTCGGTTGAAGGAGACAAGACCAGTAATGAGAGAGATGTGATTAGGCCGAAAAAGGAAACGGATAGAAAGGTTTCACCTTTGTCGACAGTGGAGTCATCTTTTGAAGCTTTGAATGTGAAGAAGTTTGATGTGGCCTTTGTAGTGGATCCTCTTTATAGTCAGTCATCTGCACAATTTGACGAAGGTGGGGCAAATGGTCTTCTTCTGTATAACCTTGGAGTGTATGGAAGGTGCTGGGTACTTTTTGATTCCAAAGAAGTTCCAGCAAAGTGCACACGATCTACAAATGTTTGTACTAGTTCAGATCTTGTTGATATCTTCTTTGCTAAAGAATGCATCGATCAGTTGGTGATAAACATGCGTACTGAGCAACATATATCTCCCACTCTCGGAGATATAACAAAGTCCCTCGAAGAGCAATACTTTTTGCCAAGGATATTTGATGGACCAGGGTCCTTTGAGGATGGAAATTCATTTGATAAGAACACACAGCTCAATGTGGGTAAGGAACATTTCAGTGACAGTGATGCGATTAAAGACATGGGCCCTCAGATTGCTAATAGTTCTTACGATGACTCCGAGGCATGGTTTGCCAATGATCATGAAAATGTCACAGTTTCTGATGAGGGATCCAACATGGGTGATCCTATGATGCAAAGACATTATGAGGAAGAGGTAGCATTCACATCCTCTGAACCTGAGATGAATGACAGATTTGAGAGTGTCACCTCATTCTTTTGTGGAGGCTTGGGAGTAACATCACTGCGGAACAGATGGGCTGGCCCTGACCATTGGAAGTACCGAAAGCCTATGGGCCCAGACAACATCTTTGCTTCTGACGATGGGTTGGATTCTGCTGCGAAGAGGCCATGTAATAAAAAATCAAAAGAATTGGATATTGAATTTACAAGTTACTTGGATGAAGGATTGCCAGACATTTTTGCTCCTGCCAAGAATCCCAAATCTTTGCTGCTTCCTCCGAGAAAGATCCCATCTCCAAACACACTTCCAGAAGATTGTCATTATCAACCAGAGGATCTTGTCAGATTGTTTCTTCGTCCAGATATTATGTGCCTTGGGAAGAGAAGTCATCGTAGAGTGTCAGATAGTGATTTTGGGCACTGGCAAAATCATTGTGATGGATCATATTTGTCGAACAAAGGAACTTCAGCTAGTGGCCTATTTGAGGATGAGTGTATTCACGGCGACTTAGAAGAGGATGAACTTGTGTCACAACCTCGTCAGGTTGATAAAGTTGAAGTTCAATATGATAAAAATTCAAAACAAGTTGATGTGCATTTGCTGAAGGAAACGCTTTGGAATCACATGCAAGGATCACTCCAGACACCTGAAAATGAAACAAGTTTTCTCACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_126975.p1 GENE.R_Transcript_126975~~R_Transcript_126975.p1 ORF type:3prime_partial len:615 (+),score=123.36,Cnd2|PF05786.10|2.8e-80,Cnd2|PF05786.10|1.4e-09 R_Transcript_126975:151-1992(+)
MTARVVQSPKSPFFLGSNDDQMERAAARAARAAAVRRNPVEIAPAQQQPPPRPSLSSNSFLTRDQIIELFRNCYKLASENRINQKNTWELKLIDHISEIIKVDAEDHNHETNFQKASCTLEAGVKIYAARVDAWHADAYRVLSTISGAGFQDDQGISVEGDKTSNERDVIRPKKETDRKVSPLSTVESSFEALNVKKFDVAFVVDPLYSQSSAQFDEGGANGLLLYNLGVYGRCWVLFDSKEVPAKCTRSTNVCTSSDLVDIFFAKECIDQLVINMRTEQHISPTLGDITKSLEEQYFLPRIFDGPGSFEDGNSFDKNTQLNVGKEHFSDSDAIKDMGPQIANSSYDDSEAWFANDHENVTVSDEGSNMGDPMMQRHYEEEVAFTSSEPEMNDRFESVTSFFCGGLGVTSLRNRWAGPDHWKYRKPMGPDNIFASDDGLDSAAKRPCNKKSKELDIEFTSYLDEGLPDIFAPAKNPKSLLLPPRKIPSPNTLPEDCHYQPEDLVRLFLRPDIMCLGKRSHRRVSDSDFGHWQNHCDGSYLSNKGTSASGLFEDECIHGDLEEDELVSQPRQVDKVEVQYDKNSKQVDVHLLKETLWNHMQGSLQTPENETSFLT

Click here to download the sequence:
Link to NCBI Protein BLAST