Transcript Information: R_Transcript_126978.p2


Annotated TAIR IDAT2G32590.1
Annotated Gene NameLOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits to 447 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other Eukaryotes - 108 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13829420-13833209 | Reverse length=671
E-Value1E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4620272915667
Replicate 22.5390874922035
Replicate 32.343945242397
Condition 2: 8 Hour
Replicate 11.9360916469915
Replicate 22.288090234912
Replicate 31.6040958222668
Condition 3: 24 Hour
Replicate 11.3881464835356
Replicate 22.9748953852407
Replicate 32.2396721074965


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_126978.p2 GENE.R_Transcript_126978~~R_Transcript_126978.p2 ORF type:3prime_partial len:215 (+),score=44.80,Cnd2|PF05786.10|1.5e-08,Cnd2|PF05786.10|2.7e-10 R_Transcript_126978:1444-2085(+)
ATGGCTAGCAATGTATACTATGTTGAATTCTTCTGTTTTTTTGATAGACAACTAATTAGTTTTTGTCAAAGGAACTGTGTAGGCCCAGACAACATCTTTGCTTCTGACGATGGGTTGGATTCTGCTGCGAAGAGGCCATGTAATAAAAAATCAAAAGAATTGGATATTGAATTTACAAGTTACTTGGATGAAGGATTGCCAGACATTTTTGCTCCTGCCAAGAATCCCAAATCTTTGCTGCTTCCTCCGAGAAAGATCCCATCTCCAAACACACTTCCAGAAGATTGTCATTATCAACCAGAGGATCTTGTCAGATTGTTTCTTCGTCCAGATATTATGTGCCTTGGGAAGAGAAGTCATCGTAGAGTGTCAGATAGTGATTTTGGGCACTGGCAAAATCATTGTGATGGATCATATTTGTCGAACAAAGGAACTTCAGCTAGTGGCCTATTTGAGGATGAGTGTATTCACGGCGACTTAGAAGAGGATGAACTTGTGTCACAACCTCGTCAGGTTGATAAAGTTGAAGTTCAATATGATAAAAATTCAAAACAAGTTGATGTGCATTTGCTGAAGGAAACGCTTTGGAATCACATGCAAGGATCACTCCAGACACCTGAAAATGAAACAAGTTTTCTCACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_126978.p2 GENE.R_Transcript_126978~~R_Transcript_126978.p2 ORF type:3prime_partial len:215 (+),score=44.80,Cnd2|PF05786.10|1.5e-08,Cnd2|PF05786.10|2.7e-10 R_Transcript_126978:1444-2085(+)
MASNVYYVEFFCFFDRQLISFCQRNCVGPDNIFASDDGLDSAAKRPCNKKSKELDIEFTSYLDEGLPDIFAPAKNPKSLLLPPRKIPSPNTLPEDCHYQPEDLVRLFLRPDIMCLGKRSHRRVSDSDFGHWQNHCDGSYLSNKGTSASGLFEDECIHGDLEEDELVSQPRQVDKVEVQYDKNSKQVDVHLLKETLWNHMQGSLQTPENETSFLT

Click here to download the sequence:
Link to NCBI Protein BLAST