Transcript Information: R_Transcript_126979.p1


Annotated TAIR IDAT2G32590.1
Annotated Gene NameLOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits to 447 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other Eukaryotes - 108 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13829420-13833209 | Reverse length=671
E-Value8E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.42780377237622
Replicate 21.6403359700233
Replicate 30.8947944373497
Condition 2: 8 Hour
Replicate 11.1477749194021
Replicate 20
Replicate 32.2689513275484
Condition 3: 24 Hour
Replicate 10.89678934483219
Replicate 21.2061469705784
Replicate 31.0259861571983


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_126979.p1 GENE.R_Transcript_126979~~R_Transcript_126979.p1 ORF type:complete len:128 (+),score=14.17,Cnd2|PF05786.10|6.6e-19 R_Transcript_126979:151-534(+)
ATGACAGCGCGTGTAGTTCAGTCACCAAAGAGCCCGTTCTTCCTAGGCTCCAACGACGATCAAATGGAACGCGCCGCCGCACGTGCTGCACGCGCCGCCGCAGTCCGTCGTAATCCCGTCGAAATCGCTCCTGCTCAACAACAACCACCTCCTCGTCCTTCTCTGTCCTCGAACTCCTTTCTTACTCGCGACCAGATCATCGAGCTCTTCCGTAACTGCTACAAGCTCGCCTCTGAGAATAGGATAAACCAGAAGAATACGTGGGAGTTGAAGCTGATTGATCATATAAGTGAGATCATCAAAGTTGATGCTGAAGATCATAACCACGAGACCAACTTTCAAAAGGTAGTTGTGGGTGAGTGGCGTTTATTGAAGAGAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_126979.p1 GENE.R_Transcript_126979~~R_Transcript_126979.p1 ORF type:complete len:128 (+),score=14.17,Cnd2|PF05786.10|6.6e-19 R_Transcript_126979:151-534(+)
MTARVVQSPKSPFFLGSNDDQMERAAARAARAAAVRRNPVEIAPAQQQPPPRPSLSSNSFLTRDQIIELFRNCYKLASENRINQKNTWELKLIDHISEIIKVDAEDHNHETNFQKVVVGEWRLLKRR*

Click here to download the sequence:
Link to NCBI Protein BLAST