Transcript Information: R_Transcript_127090.p1


Annotated TAIR IDAT1G18485.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:6363172-6366084 | Forward length=970
E-Value5E-142
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44884330216522
Replicate 20.043025205771103
Replicate 30.37552028846151
Condition 2: 8 Hour
Replicate 10.30105571656449
Replicate 20.45821479182757
Replicate 30.74391846804865
Condition 3: 24 Hour
Replicate 10.5645362433042
Replicate 20.45195202644626
Replicate 30.53822224639911


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_127090.p1 GENE.R_Transcript_127090~~R_Transcript_127090.p1 ORF type:5prime_partial len:488 (+),score=80.40,PPR|PF01535.16|0.027,PPR|PF01535.16|4.7e-05,PPR|PF01535.16|13,PPR|PF01535.16|2.6e-05,PPR|PF01535.16|1.9e+02,PPR|PF01535.16|5.6e-09,PPR|PF01535.16|9.1e+02,PPR|PF01535.16|1.3,PPR|PF01535.16|9.7e-07,PPR|PF01535.16|0.86,PPR|PF01535.16|0.0083,PPR_2|PF13041.2|8,PPR_2|PF13041.2|9.5e-06,PPR_2|PF13041.2|33,PPR_2|PF13041.2|1.5e-06,PPR_2|PF13041.2|6.8e+02,PPR_2|PF13041.2|2.7e-12,PPR_2|PF13041.2|2.1e+02,PPR_2|PF13041.2|1.7e-07,PPR_2|PF13041.2|0.3,PPR_2|PF13041.2|0.78,PPR_3|PF13812.2|9.7,PPR_3|PF13812.2|0.00086,PPR_3|PF13812.2|4.4e+02,PPR_3|PF13812.2|0.0096,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|1.9e-05,PPR_3|PF13812.2|2.5e+03,PPR_3|PF13812.2|0.41,PPR_3|PF13812.2|8.5,PPR_3|PF13812.2|0.087,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|0.019,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|0.0016,PPR_1|PF12854.3|75,PPR_1|PF12854.3|5.9e+03,PPR_1|PF12854.3|0.42,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|0.00021 R_Transcript_127090:2-1465(+)
TTGAGTCATGAGGTAACTATGAGTAATGCCCTAATTGACATGTATGCCAAATGTGGCTTTTCATATGAAGCTCAAATGCTGTTTGAGAAACATGAAAATAAAAATGTGGTTTCATGGAATTCCTTGATGTGGAATTTTGCGAGGGAGGGTGATGCCGAAAAGGTGTTTGATCTTTTGAGGGAAATGCAAATGGTGGGAGGTGAAATTGAGATCAATGAGGTGACCATTTTGAATGTATTACCCGTATTCTCAAACGAGTCACGGTTGATGAGGTTAAAAGAACTTCATTGCTACTCATACAAACATGGATTTCTTCAACAAGAATTGGTGTGTAATGCATTTATAGCTGCCTATTCGAAATGTGAGTCATTAAGTTCAGCTAGTTCTGTCTTTAGTGGGACTGAGATCAAAACAGTGAACTCTTGGAATGCACTAATTGATGGCCAGGCACAATATGGAGATCCGAGAAAGGCTATTGATTTGTACCTCGAAATGACATCTTTAGGCTTGCTTCCAGACAGTTTTAGCTTAAGAAGTATAGTTTTGGCCTGTTCTGAACTTGGATTGTCACTGTCTGGGAAAGAAATCCATGGATTTGTGGTGAGAAATGGGCTAGAAAAAGATCCATTTCTAACTGTTTCACTGTTTTCATTTTACTTCCGGTGTGACAAATCACATTATGCTCGCGTTTTGTTTGATAGGATAGAGAATAGAAATTTAGTTTCCTGGAATGCAATGATTACTGGGTGCACACAGAATGGACTTCCAGAGGAAGCTCTGGATTTCTTCCGTCACATGCTTGTAGAAGGGATTCAGCCCAATGAGATTACAGTAACAAGTCTGCTTGGAGCTTGTTCACAGCTTTCAAGCTTGCAGTTGGGGAAAGAAATCCACTGCTTCACCTTGAAGGCTCATCTAACAAAAGACATGATTGTTACTTCTTCTGTCATAGACATGTATGCCAAATGTGGCTGCATACAACTGTCTCGTAGATTCTTTGACAGCCTTACTGTGAGGGGCCTTCCATCATGGACTGCCATGATTTCGGGATATGGAATTCATGGAAGCGGAAATGAGGCCTTGGTATTGTTTGAGCAAATGCAAATGTCAGGTTTGAAACCTGATCACTTTACAGTTATTGGTGTACTGATGGCCTGCAGCCATGCTGGTCTCGTTAAAGAGGGTATGAGACATTTCAATGATATGCGCAATTTATATGGGATAGAGCCTAAATTGGAGCATTACACTTGTGTGGTGGATATGTTAGCTCGTGCTGGATGTTTGGATGACGCATTGAAGCTTGTTGAGAATATGCCTATGGAAGCTGACTCAAAGATATGGAGTTCTTTGGTTAGTTTTTGTAGAATCCATGGAAATAAGAGGTTGGGAAGTGTAGCAGCTAAAAAACTAATTGAACTAGAACCAAGCAGGGTAGAGAATTTTGTAATAGTATCTAATTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_127090.p1 GENE.R_Transcript_127090~~R_Transcript_127090.p1 ORF type:5prime_partial len:488 (+),score=80.40,PPR|PF01535.16|0.027,PPR|PF01535.16|4.7e-05,PPR|PF01535.16|13,PPR|PF01535.16|2.6e-05,PPR|PF01535.16|1.9e+02,PPR|PF01535.16|5.6e-09,PPR|PF01535.16|9.1e+02,PPR|PF01535.16|1.3,PPR|PF01535.16|9.7e-07,PPR|PF01535.16|0.86,PPR|PF01535.16|0.0083,PPR_2|PF13041.2|8,PPR_2|PF13041.2|9.5e-06,PPR_2|PF13041.2|33,PPR_2|PF13041.2|1.5e-06,PPR_2|PF13041.2|6.8e+02,PPR_2|PF13041.2|2.7e-12,PPR_2|PF13041.2|2.1e+02,PPR_2|PF13041.2|1.7e-07,PPR_2|PF13041.2|0.3,PPR_2|PF13041.2|0.78,PPR_3|PF13812.2|9.7,PPR_3|PF13812.2|0.00086,PPR_3|PF13812.2|4.4e+02,PPR_3|PF13812.2|0.0096,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|1.9e-05,PPR_3|PF13812.2|2.5e+03,PPR_3|PF13812.2|0.41,PPR_3|PF13812.2|8.5,PPR_3|PF13812.2|0.087,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|0.019,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|0.0016,PPR_1|PF12854.3|75,PPR_1|PF12854.3|5.9e+03,PPR_1|PF12854.3|0.42,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|0.00021 R_Transcript_127090:2-1465(+)
LSHEVTMSNALIDMYAKCGFSYEAQMLFEKHENKNVVSWNSLMWNFAREGDAEKVFDLLREMQMVGGEIEINEVTILNVLPVFSNESRLMRLKELHCYSYKHGFLQQELVCNAFIAAYSKCESLSSASSVFSGTEIKTVNSWNALIDGQAQYGDPRKAIDLYLEMTSLGLLPDSFSLRSIVLACSELGLSLSGKEIHGFVVRNGLEKDPFLTVSLFSFYFRCDKSHYARVLFDRIENRNLVSWNAMITGCTQNGLPEEALDFFRHMLVEGIQPNEITVTSLLGACSQLSSLQLGKEIHCFTLKAHLTKDMIVTSSVIDMYAKCGCIQLSRRFFDSLTVRGLPSWTAMISGYGIHGSGNEALVLFEQMQMSGLKPDHFTVIGVLMACSHAGLVKEGMRHFNDMRNLYGIEPKLEHYTCVVDMLARAGCLDDALKLVENMPMEADSKIWSSLVSFCRIHGNKRLGSVAAKKLIELEPSRVENFVIVSNF*

Click here to download the sequence:
Link to NCBI Protein BLAST