Transcript Information: R_Transcript_127099.p1


Annotated TAIR IDAT3G49142.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18215788-18217848 | Reverse length=686
E-Value4.2e-309
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8789812747505
Replicate 20.7101689846689
Replicate 31.2127096374434
Condition 2: 8 Hour
Replicate 11.116267372595
Replicate 21.3482296404244
Replicate 32.1888706924584
Condition 3: 24 Hour
Replicate 11.6205510984262
Replicate 21.1676313530306
Replicate 31.9312680606086


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_127099.p1 GENE.R_Transcript_127099~~R_Transcript_127099.p1 ORF type:complete len:680 (+),score=120.99,PPR_2|PF13041.2|3.3e+03,PPR_2|PF13041.2|4.7e-10,PPR_2|PF13041.2|1.5e+03,PPR_2|PF13041.2|1.5e-07,PPR_2|PF13041.2|6.7e-06,PPR_2|PF13041.2|0.0048,PPR_2|PF13041.2|8.7e-07,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|16,PPR_2|PF13041.2|8.1e+03,PPR|PF01535.16|47,PPR|PF01535.16|0.0018,PPR|PF01535.16|0.26,PPR|PF01535.16|8.1e-07,PPR|PF01535.16|0.0027,PPR|PF01535.16|5.9e-05,PPR|PF01535.16|2.3e-05,PPR|PF01535.16|8.9,PPR|PF01535.16|0.00064,PPR|PF01535.16|0.26,PPR|PF01535.16|8.5e+03,PPR|PF01535.16|5.1e+03,DYW_deaminase|PF14432.2|1.2e-42,PPR_1|PF12854.3|8.3e+02,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|25,PPR_1|PF12854.3|6.2e-06,PPR_1|PF12854.3|30,PPR_1|PF12854.3|0.00088,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|0.00028,PPR_3|PF13812.2|0.0077,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|0.32,PPR_3|PF13812.2|11,PPR_3|PF13812.2|0.8,PPR_3|PF13812.2|0.97,PPR_3|PF13812.2|15,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|9.6,PPR_3|PF13812.2|1.6e+04 R_Transcript_127099:108-2147(+)
ATGATAGTTGGCCGTTTTTGCTTCACCCGCCACTTCTCAACGGCCATTCAACTGAATGTTCTGTCCTCACCCATTCAAAGACCTATACTTGCTCAGAAAAATGAAGTTCTCACTGAGGACCTTTGTAACCAAATTTTGGATTCGTACCCAGATTCCAAAACCTTGAAAAAACTTCACACCCAGATAATAAATGATAAAATTCTTCATTCAAACCCATCACTTGTACTCAAATTGATCCGAGCATACGCTGGTTGTGGTGAATTGGGTATTGCCCGCAACCTGTTCGACAAATTTCCTCAGGGAAATATCATCTTTTTCAATGTTATGATCAGGAGCTATGTTACCCACCATCATTATCAAGATGCTCTTTGGGTTTTCAAGAGCATGTCCAGCTATGGTATTAGACCTGACCATTATACATACCCATGTGTTTTAAAGGCTTGTTCTGGGTCAGAAAATTTGTGGGTTGGGTTGCAAATTCATACTCAAGTTTGTAAAGTTGGGCTGGATTTGAATATGTTTGTTGGTAATGGGTTAGTGGCTATGTATGGGAAATGTGGCTGTTTGATTGAGGCTAGAAAAGTTCTTGATGGGATGCCTGTAAGAGATATAGTTTCTTGGAATTCAATGGTTGCTGGGTATGCTCAAAAGGGGCAGTTTGATCATGCCGTGAAGCTCTGCAGAGAAATGGAGTTGTTGAAGGTGATCCCGAATGCTGGAACGATGGCGAGTTTACTTCCTTCTGTGACGCACACGTCATTTGAGAATATTGCATTTGTTGAGGAAATGTTTGAGAAAGTGGGTAAGAAGAGTTTATTCTCATGGAATGTAATGATAGCTGTGTATATGAACAACTCAATGGCTGCTGAAGCAATTGATCTTTATTGGCAAATGGAAGCAATTGGAATGGACCCCGATGGAATTACTATTACTAGTGTTCTCCCTGCTTGTGGGGATCTTTCAGCTTTGTCAGTAGGAAGGAAGATTCATGATTATGTAGAAAGGAAGAGATTTCGACCAAATTTGTCCGTTGAGAATGCATTAATCGACATGTATGCCAAGTGTGGTTGCCTGAAGGAAGCAAGGAAAGTCTTTGATACCATGCGGGTTCATGATGTTGTGTCTTGGACTTCTATGATTTTTGCTTATGGTGTAAGTGGACGAGGTCGGGATGCTGTTGCTCTTTTTGCTGGAATGAGAGACGAGGGCTTTATTCCTGACTCCATTGCTTTTGTTGCTGTTATGTCGGCTTGCAGTCATTCAGGAATGTTGGAAGAAGGGCGACATCACTATAAGGTAATTATGGAGGAATACAATATAGCCCCAAGGTTAGAGCATTATTGTTGCATGGTTGACCTGTTAGGACGCGCAGGGAGAGTGGATGAGGCTTTCTCTTTCGTCAAGGAGATGCCGATTGAGCCAAATGAAAGAATTTGGGGATCTCTATTGGGTGCTTGTCGTGTCCACTCCAACATGAATATTGGACTGATAGCTGCTGACTGTCTGTTCCAGATGGCTCCTGAACAAGCTGGATACTATGTCCTGTTATCTAACATTTATGCCAAAGCTGGTAAATGGAAGGAGGTTAGCAAAATTAGATCAATCATGAAGAGTAAAGGTATGAAGAAAACACCTGGTATTAGTAATGTGGAGCACAAAGATCAGGTTTACACTTTTCTTTCAGGGGACCAATCCCATCCACAGTCTAAAGAGATTTATGAAAAGTTGGCTGTGTTAGTTGGAAAAATGAAAGAGGAAGGCTATGTTCCTGAGACGGATTCTGCTCTTCATGATGTTGAAGAGGAGGATAAAGAATGTCATCTTTCCGTCCACAGTGAGAAGTTGGCTATTGCGTTTGCTCTTATAAATATTAAACCTCCCACGATAATCAGAATTACTAAGAACCTGCGTGTCTGTGGAGATTGTCACTCTGCAATCAAGCTCATCTCCAAGATCACTGATCGGGAAATAGTCGTTAGGGATACAAATAGGTTTCATACTTTCAAGAATGGGATTTGTTCATGTGGAGATTATTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_127099.p1 GENE.R_Transcript_127099~~R_Transcript_127099.p1 ORF type:complete len:680 (+),score=120.99,PPR_2|PF13041.2|3.3e+03,PPR_2|PF13041.2|4.7e-10,PPR_2|PF13041.2|1.5e+03,PPR_2|PF13041.2|1.5e-07,PPR_2|PF13041.2|6.7e-06,PPR_2|PF13041.2|0.0048,PPR_2|PF13041.2|8.7e-07,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|16,PPR_2|PF13041.2|8.1e+03,PPR|PF01535.16|47,PPR|PF01535.16|0.0018,PPR|PF01535.16|0.26,PPR|PF01535.16|8.1e-07,PPR|PF01535.16|0.0027,PPR|PF01535.16|5.9e-05,PPR|PF01535.16|2.3e-05,PPR|PF01535.16|8.9,PPR|PF01535.16|0.00064,PPR|PF01535.16|0.26,PPR|PF01535.16|8.5e+03,PPR|PF01535.16|5.1e+03,DYW_deaminase|PF14432.2|1.2e-42,PPR_1|PF12854.3|8.3e+02,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|25,PPR_1|PF12854.3|6.2e-06,PPR_1|PF12854.3|30,PPR_1|PF12854.3|0.00088,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|0.00028,PPR_3|PF13812.2|0.0077,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|0.32,PPR_3|PF13812.2|11,PPR_3|PF13812.2|0.8,PPR_3|PF13812.2|0.97,PPR_3|PF13812.2|15,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|9.6,PPR_3|PF13812.2|1.6e+04 R_Transcript_127099:108-2147(+)
MIVGRFCFTRHFSTAIQLNVLSSPIQRPILAQKNEVLTEDLCNQILDSYPDSKTLKKLHTQIINDKILHSNPSLVLKLIRAYAGCGELGIARNLFDKFPQGNIIFFNVMIRSYVTHHHYQDALWVFKSMSSYGIRPDHYTYPCVLKACSGSENLWVGLQIHTQVCKVGLDLNMFVGNGLVAMYGKCGCLIEARKVLDGMPVRDIVSWNSMVAGYAQKGQFDHAVKLCREMELLKVIPNAGTMASLLPSVTHTSFENIAFVEEMFEKVGKKSLFSWNVMIAVYMNNSMAAEAIDLYWQMEAIGMDPDGITITSVLPACGDLSALSVGRKIHDYVERKRFRPNLSVENALIDMYAKCGCLKEARKVFDTMRVHDVVSWTSMIFAYGVSGRGRDAVALFAGMRDEGFIPDSIAFVAVMSACSHSGMLEEGRHHYKVIMEEYNIAPRLEHYCCMVDLLGRAGRVDEAFSFVKEMPIEPNERIWGSLLGACRVHSNMNIGLIAADCLFQMAPEQAGYYVLLSNIYAKAGKWKEVSKIRSIMKSKGMKKTPGISNVEHKDQVYTFLSGDQSHPQSKEIYEKLAVLVGKMKEEGYVPETDSALHDVEEEDKECHLSVHSEKLAIAFALINIKPPTIIRITKNLRVCGDCHSAIKLISKITDREIVVRDTNRFHTFKNGICSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST