Transcript Information: R_Transcript_127109.p1


Annotated TAIR IDAT2G19910.1
Annotated Gene NameRNA-dependent RNA polymerase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:8595820-8600757 | Reverse length=992
E-Value5.3E-264
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6519828840583
Replicate 22.8582476513487
Replicate 34.4312931480786
Condition 2: 8 Hour
Replicate 12.6816658642326
Replicate 23.4559807144514
Replicate 34.588994701367
Condition 3: 24 Hour
Replicate 14.6761552080994
Replicate 23.0927026284638
Replicate 34.3013708289501


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_127109.p1 GENE.R_Transcript_127109~~R_Transcript_127109.p1 ORF type:complete len:977 (+),score=186.46,RdRP|PF05183.8|8.8e-118 R_Transcript_127109:202-3132(+)
ATGGCGGATTCTCCCTCTCCATTGTCAAAACACGGCGTATCTCTTCCACACTCAGTCGAATCGATGATCGAGACGATATGCAGGGAGCAATCGCAACCACAACCGGGATTAGCTGCTAGAACGGAGCTTCAATCACTCGGTGAACAGGAATCCCTAGAAATCCTCAACGTAATACGTAATTCCAGGATTTCTAAGACTTTTCACGGCTTCATTCTTTACTTGGCTGGAAGGAGAAAGTCCCTATCGCCATGTCGTACCGATGGTAACTTCAGCATTGCTTCTCCTCAACCACAGCAAGATATAGCAGATGGGATGGCTAGTTCACACTTCCGTAGTCCTCAGTTTCTTGCATTGCAGGGGCTTGAATTTAGAAGGCTTTTCTTGCTTCTAAGTTACATTGGGAGGAAGAAGTTGGAGGATGTGGCTTCAGTTGATGACATCAAAAACCTTCGAACTCAAAGCGAACAACTCACAATGGGATCTTATGAGTCTTTTATTTGGAATAAATTTGGCCAGCCTGGCGAGGACATTGATCGATTGAAGTATCGTGACTGGGATCCTAGACGGAAAAATTACTATTATCATTGCCATGTTTATTCAGATGGAAGCTATGCTTTCAAGGGTCCATATCTCAACTCCACAAGCACTCTCCTTCAAAGGGTTTTAAAAGATGAGAATGTGCTCATTGTGAAGTTTTCTGAAGAAAATAAAAATACAGTTGCAACAGGCCACTCTGATATACTGCACAAATTTCGTAAAGTTGCAGATGATGGAATTTGGCTTGGTGATATCTGCTACCGCTTTTTTGTTTTCAAAGATGGAGGGAAAGAGGCGAAGAAAAAGGACCCAGCATCAAGCTCTGTCAAGTGCTATTTCGTTAATGTGGAGGCTTTTGCACAAACTTTAAAGAGAAGACCTAGCTGTTCCGGAAAGATATCTATCCATGAAATGAGGTGCATCTTTATGCATGTGCATACTGTGTCCAGCTTATCAGCATATATGGCTAGGTTTTCACTTATACTATCAAAGACCGTTAAATTAGAAGTCAATCTGGATGGTGTTTGTGTTCGAGATATTGATGACATAGCTTGCAAGAATGAAGATGGATCTTTTGTTTATGGTAAAGATGGAAAACTCCTCATACAGACTGATGGTACTGGTTTCATTTCGGAAGACTTAGCTCTGAGGTGTCCTAGAAATTGCTATAAAGGAAGCTTCCCAAATGATGCAAACTTTGAGAGATATCTTGATGTCATCAAACTTGTAGACAATTCCTTGGAACAAAGCCTAAAAAGTCGTCGTTCAGAGCCGCCATTGTTGATCCAGTTCCGTATGTTACATAATGGGCGTGCTGTTAAGGGAACTGTTCTTGTTAATAAACAGCTTCCAGAAAGAGCAATCCAGATTCGACGTTCTATGATTAAGGTCCACACTGATCGCGAATTTCAGGGACCTCCAACTATAAATTCATTTGAGATTGTCTCAACCAGCAATCGGCCAAAGAAACCACATTTCTCAAGATTCTTGATTGCACTTCTTCATTATGGAGGTGTTCCAAGGGAGTTCTTTACTGATATTCTAGATGAAGCTGTTGCTGACACTCAAAATGCGTTATGTAACATGCGTGGGGCTCTGCGAGTTGCCCTTATCCATGGTGACATGGATGATGATTTTACAGTTGCTAGGATGATTTTGTCTGGAATTCCAATTGAAGAACCATATATTCAATGGCGCTTAGCTATCCTCGCAAAGGAGGAAAAGAAGAGACTCAAAGAAGGAAAGCTACCAATCAAGGAAAGCTTCTACCTTATGGGAACAGCTGACCCCACTGGCTGTCTGAACAAGAATGAAGTTTGCATTATTCACGAAAATGGACAAATCACAGGAGATGTACTTGTTTATAGAAATCCCGGGATCCACTTTGGGGATATTCGTCTTCTTAAAGCAACCTACCACAAAGGTTTGGAGGATATTGTTGGGAATTCCAAGTACGGAATTTTTTTTCCTACAAACGGACCCAGGTCCTTGGCTGACCAAATGGCTGGTGGTGACTATGATGGCGATTTGTTTTGGGTGTCAAGAAATCCAGAGCTTTTGAAGCACTTCACACCCAGTCAACCCTGGACATGCAACTCCTCTTTGAGTAATTCAATCACCAAGAAGCCAACCGAGTTTTCAGATGATGAGCTAGAGAATGAGCTTTTCAATCTCTTCTTGGACACAAGATTTCGACCAAGTCATTCTACAGGGATTGCTGCTGATAGCTGGCTGTGCTACATGGATCGGATGTTGACTTTGGGGCATGAATGTGTGGAGGAGAGAAAACTTCTTAACGAAAAGATGCTTCGTTTGGTTGACATATATTATGATGCTCTTGATGCACCCAAAAAGGGGGTAAAGGTTGAAGTTCCACCAGAATTGGTTCCTAAAAAATATCCACATTATATGGGAAGGATGTTCAGTTACCGATCCACATCAATCTTGGGAGAAATTTTTGATAGAGCAGATGAACTGAAATTGGAGGATGCTTCAATTGAAGTCTGGAAGCTATCCAACTTTGATGTTGAAATTCCCGAAGCCCGGTTGCTATTATGGAAAGACCATTACAAGAGATATAGATCTGAGATGAAAAACGCTTTGAATTTAGAGGCTGAATCAAAGATTCAGGCTGCAGACGTGGTGCAGGACTACAAACAGATATTATATGGAGCTGATGACTTCAAGAAGAGCCACAGAGCATGGGAGGAGATTCGTCTTGATGCATTGGCTTTGTATCATGCATCCTATGATTATGCCATTGAAACAGGAAAGGCAAATTACTGTGGATTTGCTTGGAAAGTTGCTCGCCCAGCATTGTTGAAGGCATTTATTGATGAGCAAGAGGAGAAGCCTGTCCCTTGTTTACTGTCGGTACTTAAACAAATCATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_127109.p1 GENE.R_Transcript_127109~~R_Transcript_127109.p1 ORF type:complete len:977 (+),score=186.46,RdRP|PF05183.8|8.8e-118 R_Transcript_127109:202-3132(+)
MADSPSPLSKHGVSLPHSVESMIETICREQSQPQPGLAARTELQSLGEQESLEILNVIRNSRISKTFHGFILYLAGRRKSLSPCRTDGNFSIASPQPQQDIADGMASSHFRSPQFLALQGLEFRRLFLLLSYIGRKKLEDVASVDDIKNLRTQSEQLTMGSYESFIWNKFGQPGEDIDRLKYRDWDPRRKNYYYHCHVYSDGSYAFKGPYLNSTSTLLQRVLKDENVLIVKFSEENKNTVATGHSDILHKFRKVADDGIWLGDICYRFFVFKDGGKEAKKKDPASSSVKCYFVNVEAFAQTLKRRPSCSGKISIHEMRCIFMHVHTVSSLSAYMARFSLILSKTVKLEVNLDGVCVRDIDDIACKNEDGSFVYGKDGKLLIQTDGTGFISEDLALRCPRNCYKGSFPNDANFERYLDVIKLVDNSLEQSLKSRRSEPPLLIQFRMLHNGRAVKGTVLVNKQLPERAIQIRRSMIKVHTDREFQGPPTINSFEIVSTSNRPKKPHFSRFLIALLHYGGVPREFFTDILDEAVADTQNALCNMRGALRVALIHGDMDDDFTVARMILSGIPIEEPYIQWRLAILAKEEKKRLKEGKLPIKESFYLMGTADPTGCLNKNEVCIIHENGQITGDVLVYRNPGIHFGDIRLLKATYHKGLEDIVGNSKYGIFFPTNGPRSLADQMAGGDYDGDLFWVSRNPELLKHFTPSQPWTCNSSLSNSITKKPTEFSDDELENELFNLFLDTRFRPSHSTGIAADSWLCYMDRMLTLGHECVEERKLLNEKMLRLVDIYYDALDAPKKGVKVEVPPELVPKKYPHYMGRMFSYRSTSILGEIFDRADELKLEDASIEVWKLSNFDVEIPEARLLLWKDHYKRYRSEMKNALNLEAESKIQAADVVQDYKQILYGADDFKKSHRAWEEIRLDALALYHASYDYAIETGKANYCGFAWKVARPALLKAFIDEQEEKPVPCLLSVLKQII*

Click here to download the sequence:
Link to NCBI Protein BLAST