Transcript Information: R_Transcript_127173.p1


Annotated TAIR IDAT1G74850.1
Annotated Gene Nameplastid transcriptionally active 2
Annotated Gene Symbol(s)PTAC2
Annotation TypeOrtholog
Chromosome Positionchr1:28119237-28122314 | Reverse length=862
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0946932498867
Replicate 21.9449697930276
Replicate 33.042301086989
Condition 2: 8 Hour
Replicate 11.6943344048317
Replicate 22.171201696633
Replicate 33.3629100033306
Condition 3: 24 Hour
Replicate 13.1515739832674
Replicate 22.1907567424792
Replicate 32.9558172624047


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_127173.p1 GENE.R_Transcript_127173~~R_Transcript_127173.p1 ORF type:5prime_partial len:896 (+),score=158.16,PPR_2|PF13041.2|0.0035,PPR_2|PF13041.2|5.2e-07,PPR_2|PF13041.2|7.3e-13,PPR_2|PF13041.2|9.6e-12,PPR_2|PF13041.2|4.4e-12,PPR_2|PF13041.2|0.037,PPR_2|PF13041.2|1.7e-14,PPR_2|PF13041.2|5.4e-07,PPR_2|PF13041.2|7.2e-10,PPR_2|PF13041.2|0.014,PPR_2|PF13041.2|3.5e-05,PPR_2|PF13041.2|2.4e-05,PPR_2|PF13041.2|6.6e-07,PPR_2|PF13041.2|0.0054,PPR_2|PF13041.2|0.0012,PPR_2|PF13041.2|2.3e+03,PPR_2|PF13041.2|1.6,PPR|PF01535.16|19,PPR|PF01535.16|0.0001,PPR|PF01535.16|2.6e-08,PPR|PF01535.16|0.028,PPR|PF01535.16|5.7e-07,PPR|PF01535.16|0.24,PPR|PF01535.16|3.9e-07,PPR|PF01535.16|2e-05,PPR|PF01535.16|7.4e-05,PPR|PF01535.16|0.063,PPR|PF01535.16|4.7,PPR|PF01535.16|0.016,PPR|PF01535.16|0.086,PPR|PF01535.16|0.89,PPR|PF01535.16|0.0081,PPR|PF01535.16|5.9e+02,PPR|PF01535.16|6.8,PPR_1|PF12854.3|8.4e-05,PPR_1|PF12854.3|6.5e-06,PPR_1|PF12854.3|0.37,PPR_1|PF12854.3|5.8e-07,PPR_1|PF12854.3|0.092,PPR_1|PF12854.3|3.7e-06,PPR_1|PF12854.3|2.1e-06,PPR_1|PF12854.3|0.0093,PPR_1|PF12854.3|0.56,PPR_1|PF12854.3|98,PPR_1|PF12854.3|0.019,PPR_1|PF12854.3|7.9,PPR_1|PF12854.3|0.49,PPR_1|PF12854.3|0.00021,PPR_1|PF12854.3|3.1e+03,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|29,PPR_3|PF13812.2|4.1e-05,PPR_3|PF13812.2|0.00075,PPR_3|PF13812.2|0.00094,PPR_3|PF13812.2|4.8,PPR_3|PF13812.2|0.00024,PPR_3|PF13812.2|0.078,PPR_3|PF13812.2|0.0039,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|2.4e+03,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|0.53,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|83,ECSIT|PF06239.7|6.4e+02,ECSIT|PF06239.7|1.7e+03,ECSIT|PF06239.7|10,ECSIT|PF06239.7|0.26,ECSIT|PF06239.7|63,ECSIT|PF06239.7|65,ECSIT|PF06239.7|50,TPR_14|PF13428.2|1.3e+04,TPR_14|PF13428.2|1.8e+02,TPR_14|PF13428.2|4.8e+03,TPR_14|PF13428.2|1.2e+02,TPR_14|PF13428.2|4.1e+03,TPR_14|PF13428.2|1.5e+03,TPR_14|PF13428.2|6.7e+03,TPR_14|PF13428.2|1.8e+02,TPR_14|PF13428.2|1.6e+03,TPR_14|PF13428.2|0.64,RPM2|PF08579.7|1.7e+02,RPM2|PF08579.7|0.85,RPM2|PF08579.7|8.8e+02,RPM2|PF08579.7|1.1e+03,RPM2|PF08579.7|5.3,RPM2|PF08579.7|1.4e+04,RPM2|PF08579.7|2.3e+03 R_Transcript_127173:3-2690(+)
ACAGAAAAAGCCAACGGTCTTTGTTATCTAAAACACCATCATCTCCAATCCCTCACCTTCATCTTCTTCTCACTTTCCTCAAATATCAACCAAATTATCACCCAAAAACCCCTCAAAAACCCCAAATTCAACTACCCCTTTTGTAATGCAAACCCAATTTTACCCAACATGCTAAAAACCCTCACTTTTTCCCTTTCTATTTCATCCCAATCTATTCTTTCTCCAAAACCCAACAACCCATTACTTCCCAATTCATTTTCCCACAAAAAGTTTGCATTTTTATCAAAACCCCTTCTTGTTTCTTCAGATTTTAAGGTCAAAGCCAAGCCTAAAGACCTAATCTTGGGAAATCCATCAGTCACTGTTGAAAAGGGTAAGTATAGTTATGATGTTGAGACTTTAATTAACAAGCTTAGTAGCCTCCCACCAAGGGGTTCTATTGCTAGGTGTCTTGATTCTTTTAAAAACAAGCTTTCTCTTAATGATTTTGCCTTAGTTTTTAAGGAGTTTGCTCAAAGAGGCGACTGGCAAAGGTCCTTAAGGTTGTTTAAGTATATGCAGCGCCAAATTTGGTGCAAACCCAATGAACATATTTATACTATTATTATTGGGGTGCTTGGTAGAGAAGGGTTACTTGAGAAATGCCATGAAGTGTTTGATGAAATGCCTGTTCATAATGTGCCTCGTAGCGTCTTCTCTTATACTGCTTTGATTAATGCTTATGGTAGGAATGGTAAGTACGAGATTGCCCTTGAGTTGTTGAGTAGAATGAAGCGAGAGAGGGTCGTGCCGAGTATTTTGACTTATAATACTGTGATTAATTCTTGTGCTAGAGGAGGGTTGGATTGGGAAGAATTGTTGGGGTTGTTTGCTGAGATGAGGCATGAGGGGATTCAGCCTGATATTGTGACTTATAATACTTTGCTTAGTGCTTGCGCTAGTAGAGGGCTCGGTGATGAGGCCGAGATGGTGTTTAGGACGATGAATGAGAGTGGGGTTTTGCCTGATATAACAACTTATAGTTATGTTGTCGAGACTTTTGGGAAATTGGGTAAGCTTGGAAAGGTCTCTGATCTTCTAAAGGAGATGGAGTTGAGTGGGAAGTTACCTGATATATCATCGTATAATGTCTTATTAGAGGCTTATGCAAATGAAGGGTTGATTAAAGAGGCTATGGGGGTTTTTAGGCAGATGCAGGAGGCGGGTTGCATGCCTAATGCTAGTACGTATAGTATTCTGTTGAACTTGTATGGTAGTGAAGGTAGGTATGATGATGTTCGTGAGCTTTTCCTTGAGATGAAAGTGAGTAATACTGAGCCAGATGCCGGTACATATAATATCCTTATCCAGGTTTTTGGTGAGGGTGGATATTTCAAGGAAGTGGTGACTTTGTTCCATGATATGGTCGAGGAGAATGTTGAGCCGAATATGGAGACCTATGAAGGATTGATATTTGCTTGTGGAAAAGGGGGGTTACATCAAGATGCAAAAGAGATTTTACTTCATATGAATGAGAAAGGTTTGGTTCCAAGTCCTAAGGCCTACACTGGAGTTGTTGAAGCATATGGACAGGCTGCATTATATGAGGAAGCTATTGTTGCATTTAACACGATGAATGAGGTGGGAAGCCGACCTACTGTGGAAACTTACAATTCTCTGATTCACACATTTGCAAGAGGTGGACTTTACAAGGAGATTAATGCAATCTTGACTATGATGGGTGAGAGTGGAGTTCCAAGGGATACAACTTCATTTAATGGTGTTATTGAAGGTTTCAGACATGGAGGGCAGTTTGAAGATGCTGTCAAGGCTTACATTGAGATGGACAAGGCAAGATGTGACCCGAATGAGCAGACACTTGAGGCAGTCTTGAGTGTTTACTGCTTTGCTGCTCTTGTTGACGAGGCAGAGGAGCAGTTTCAGGAAATAAAAGCTTCAGGAATACTACCGAGTATGATGTGTTACTGTATGATGATTGCTGTCTATGCAAAAAATGAAAGGTTGAATGACGCCTATGAGTTGCTCGCTGAGATGCTCAATAATAGGACATCCAATATTCATCAAGTGATGGCTCAGATGATCAAGGGAGATTTTGATGATGACTCCAACTGGCAGATGGTGGAATATGTATTTGACAAACTAAAATCTGAAGGCTGTGCCTTTGGAATGAGATTTTATAATACTCTTCTAGAAGCACTTTGGTGGCTGGGCCAGAAGGAACGTGCAGCAAGGGTTCTAAGGGAAGCTACAAAGAGGGGACTTTTCCCCGAGCTATTTCGCAATAACAAACTGGTCTGGTCTCTTGACGTACATAGGATGTGGCCAGGCAGTACATGTACAGCAGTATCAGTTTGGCTCAATGATATGCTCAAGATGTACAAGGATGGGACAGATCTTCCTCAACTGGCAACTCTGGTTGTGGTACGAGGAGATATGGAGAAGAGTTCTGCATCACAGGAATTTCCTGTCGCAAAGGTTGCCTATTCATTTCTAAAGGATAACTTACCATCATCGTCATCGTTTTCTTTCCCTAGTTGGAATAAGGGTCGCATTGTATGCCAGCGTACTCAACTCAAGCGATTATTGTCAGAGGTTGACCAATGTTCAGGCGAATCTGAGATACACGAAGTGATTGGCCTTATTAACACTACATTGCCTCTCCCTATGTCGAGGGCATCTACTAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_127173.p1 GENE.R_Transcript_127173~~R_Transcript_127173.p1 ORF type:5prime_partial len:896 (+),score=158.16,PPR_2|PF13041.2|0.0035,PPR_2|PF13041.2|5.2e-07,PPR_2|PF13041.2|7.3e-13,PPR_2|PF13041.2|9.6e-12,PPR_2|PF13041.2|4.4e-12,PPR_2|PF13041.2|0.037,PPR_2|PF13041.2|1.7e-14,PPR_2|PF13041.2|5.4e-07,PPR_2|PF13041.2|7.2e-10,PPR_2|PF13041.2|0.014,PPR_2|PF13041.2|3.5e-05,PPR_2|PF13041.2|2.4e-05,PPR_2|PF13041.2|6.6e-07,PPR_2|PF13041.2|0.0054,PPR_2|PF13041.2|0.0012,PPR_2|PF13041.2|2.3e+03,PPR_2|PF13041.2|1.6,PPR|PF01535.16|19,PPR|PF01535.16|0.0001,PPR|PF01535.16|2.6e-08,PPR|PF01535.16|0.028,PPR|PF01535.16|5.7e-07,PPR|PF01535.16|0.24,PPR|PF01535.16|3.9e-07,PPR|PF01535.16|2e-05,PPR|PF01535.16|7.4e-05,PPR|PF01535.16|0.063,PPR|PF01535.16|4.7,PPR|PF01535.16|0.016,PPR|PF01535.16|0.086,PPR|PF01535.16|0.89,PPR|PF01535.16|0.0081,PPR|PF01535.16|5.9e+02,PPR|PF01535.16|6.8,PPR_1|PF12854.3|8.4e-05,PPR_1|PF12854.3|6.5e-06,PPR_1|PF12854.3|0.37,PPR_1|PF12854.3|5.8e-07,PPR_1|PF12854.3|0.092,PPR_1|PF12854.3|3.7e-06,PPR_1|PF12854.3|2.1e-06,PPR_1|PF12854.3|0.0093,PPR_1|PF12854.3|0.56,PPR_1|PF12854.3|98,PPR_1|PF12854.3|0.019,PPR_1|PF12854.3|7.9,PPR_1|PF12854.3|0.49,PPR_1|PF12854.3|0.00021,PPR_1|PF12854.3|3.1e+03,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|29,PPR_3|PF13812.2|4.1e-05,PPR_3|PF13812.2|0.00075,PPR_3|PF13812.2|0.00094,PPR_3|PF13812.2|4.8,PPR_3|PF13812.2|0.00024,PPR_3|PF13812.2|0.078,PPR_3|PF13812.2|0.0039,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|2.4e+03,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|0.53,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|83,ECSIT|PF06239.7|6.4e+02,ECSIT|PF06239.7|1.7e+03,ECSIT|PF06239.7|10,ECSIT|PF06239.7|0.26,ECSIT|PF06239.7|63,ECSIT|PF06239.7|65,ECSIT|PF06239.7|50,TPR_14|PF13428.2|1.3e+04,TPR_14|PF13428.2|1.8e+02,TPR_14|PF13428.2|4.8e+03,TPR_14|PF13428.2|1.2e+02,TPR_14|PF13428.2|4.1e+03,TPR_14|PF13428.2|1.5e+03,TPR_14|PF13428.2|6.7e+03,TPR_14|PF13428.2|1.8e+02,TPR_14|PF13428.2|1.6e+03,TPR_14|PF13428.2|0.64,RPM2|PF08579.7|1.7e+02,RPM2|PF08579.7|0.85,RPM2|PF08579.7|8.8e+02,RPM2|PF08579.7|1.1e+03,RPM2|PF08579.7|5.3,RPM2|PF08579.7|1.4e+04,RPM2|PF08579.7|2.3e+03 R_Transcript_127173:3-2690(+)
TEKANGLCYLKHHHLQSLTFIFFSLSSNINQIITQKPLKNPKFNYPFCNANPILPNMLKTLTFSLSISSQSILSPKPNNPLLPNSFSHKKFAFLSKPLLVSSDFKVKAKPKDLILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDSFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIIGVLGREGLLEKCHEVFDEMPVHNVPRSVFSYTALINAYGRNGKYEIALELLSRMKRERVVPSILTYNTVINSCARGGLDWEELLGLFAEMRHEGIQPDIVTYNTLLSACASRGLGDEAEMVFRTMNESGVLPDITTYSYVVETFGKLGKLGKVSDLLKEMELSGKLPDISSYNVLLEAYANEGLIKEAMGVFRQMQEAGCMPNASTYSILLNLYGSEGRYDDVRELFLEMKVSNTEPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHQDAKEILLHMNEKGLVPSPKAYTGVVEAYGQAALYEEAIVAFNTMNEVGSRPTVETYNSLIHTFARGGLYKEINAILTMMGESGVPRDTTSFNGVIEGFRHGGQFEDAVKAYIEMDKARCDPNEQTLEAVLSVYCFAALVDEAEEQFQEIKASGILPSMMCYCMMIAVYAKNERLNDAYELLAEMLNNRTSNIHQVMAQMIKGDFDDDSNWQMVEYVFDKLKSEGCAFGMRFYNTLLEALWWLGQKERAARVLREATKRGLFPELFRNNKLVWSLDVHRMWPGSTCTAVSVWLNDMLKMYKDGTDLPQLATLVVVRGDMEKSSASQEFPVAKVAYSFLKDNLPSSSSFSFPSWNKGRIVCQRTQLKRLLSEVDQCSGESEIHEVIGLINTTLPLPMSRASTK*

Click here to download the sequence:
Link to NCBI Protein BLAST