Transcript Information: R_Transcript_127203.p1


Annotated TAIR IDATCG00860.1
Annotated Gene NameChloroplast Ycf2;ATPase, AAA type, core
Annotated Gene Symbol(s)YCF2.1
Annotation TypeOrtholog
Chromosome PositionchrC:86474-93358 | Forward length=2294
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2662394379582
Replicate 21.2641751559551
Replicate 31.1093577108084
Condition 2: 8 Hour
Replicate 11.3460815808695
Replicate 20.7317042487299
Replicate 31.2116912848688
Condition 3: 24 Hour
Replicate 10.96158354880436
Replicate 21.0392530367288
Replicate 31.2891972655895


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_127203.p1 GENE.R_Transcript_127203~~R_Transcript_127203.p1 ORF type:5prime_partial len:764 (+),score=25.24,AAA|PF00004.25|1.6e-08 R_Transcript_127203:1-2292(+)
ACTTTAACGACAGAAAAAAGGATTGATCAAATTCAAATTCTATTGAGTCTGACTCATAGTGATCATTTATCAAAGAATGACTCAGGTTATCAAATGATTGAACAACCGGGAGCAATTTACTTACGATATTTAGTTGACATTCATAAAAAGTATCTAATGAATTATGAGTTCAATACATCTTGTTTAGCAGAAAGACGGGTATTCCTTGCTCATTATCAGACAATCACTTATTCACAAACTTCGTGTGGGGCTAATAGTTTTCATTTCCCATCTCATGGAAAACCCTTTTCGCTCCGCTTAGCCCTATCCCCCTCTAGAGGTATTTTAGTGATAGGTTCTATAGGAACTGGACGATCCTATTTGGTCAAATACCTAGCGACAAACTCCTATGTTCCTTTTATTACGGTATTTCTGAACAAGTTCTTGGATAACAAGCCTAAAGGTTTTCGTATTGATGATAGTGACGATATTGATGCTAATGACGATATTGATACTAGTGACGATATTGATGCTAGTGACGATATCGATCGTGACCTTGATACGGAACTGGAGCTGCTAACTATGATGGATGCGCTAACTATGGATATAATGCCGGAAATAGACCAATTTTATATCACCCTTCAAGTCGAATTAGCAAAAGCAATGTCTCCTTGCATAATATGGATTCCAAACATTCATGATCTGGATGTGAATAAGTCGAATTACTTATCCCTCGGTCTATTAGTGAACTATCTCTCCAGGGATTGTGAAAGATGGTCCACTAGAAATATTCTTGTTATTGCTTCGACTCATATTCCTCAAAAAGTGGATCCCGCTCTAATAGCTCTGAATCAATTAAATACATGCATTAAGATACGAAGGCTTCTTATTCCACAACAACGAAAGCACTTTTTCACTCTTTCATATACTAGGGGATTTCACTTGGAAAAGAAAATGTTCCATACTAATGGATTCGGGTCCATAACCATGGGTTCCAATGTACGAGATCTTGTAGCACTTACCAACGAGGCCCTATCGATTAGTATTACACAGAAGAAATCAATTATAGACACTAATACAATTAGATCCGCTCTTCATAGACAAACTTGGGATTTGCGATCCCAGGTAAGATCGGTTCAGGATCATGGGATCCTTTTCTATCAGATAGGAAGGGCTGTTGCACAAAATGTACTTCTAAGTAATTGCCCTATAGATCCTATATCTATCTATATGAAGAAGAAATCATGTAACGAAGGGGATTCTTATTTGTACAAATGGTACTTCGAACTTGGAACGAGCATGAAGAAATTAACGATACTTCTTTATCTTTTGAGTTGTTCTGCCGGATCGGTCGCTCAAGATCTTTGGTCTCTACCCGGACCCGATGAAAAAAATGGGATCACTTCTTATGGACTCGTTGAGAATGATTCTGATCTAGTTCATGGCCTATTAGAAATAGAAGGCGCTCTGGTGGGATCCTCACGGACAGAAAAAGATTGCAGTCAGTTTGATAATGATCGAGTGACATTGCTTCTTCGGCCCGAACTAAGGAATCCCTTAGATATGATGCAAAATGGATCTTGTTCTATCCTTGATCATAGATTTCTCTATGAAAAATACGAATCGGAATTGGAAGAAGGGGAAGGAGCCCTCGACCCGCAACAGATAGAGGAAGATTTATTCAATCACATAGTTTGGGCTCCTAGGATATGGAACCCCTGGGGCTTTCTATTTGATTGTATCGAAAGGCCCAATGAATTGGGATTTCCCTATTGGGCCAGATCATTTCGGGGCAAGCGGATCATTTATGATGAAGAGGATGAGCTTCAAGAGAATGATTCGGAGTTCTTGCAGAGTGGAACCCTGCAGTACCAGACACGAGATAGATCTTCCAAAGAACAGGGCTTTTTTCGAATAAGCCAATTCATTTGGGACCCTGCGGATCCACTCTTTTTCCTATTCAAAGATCAGCCCTTTGTCTCTGTGTTTTCACATCGAGAATTCTTTGCAGATGAAGAGATGTCAAAGGGGCTTCTTACTTCCCAAATGGATCCTCCTACATCTATATATAAACGCTGGTTTATCAAGAATACGCAAGAAAAGCACTTTGAATTGTTGATTAATCGCCAGAGATGGCTTAGAACCAATAGTTCATTATCGAATGGATCTTTCCGTTCTAATACTCTATCCGAGAGTTATCGGTATTTATCAAATCTGTTCCTATCTAATGGAACACTATTGGATCAAATGACAAAGACATTGTTGAGAAAAAGATGGCTTTTCTCGGATGAAATGAAAATTGGATTCATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_127203.p1 GENE.R_Transcript_127203~~R_Transcript_127203.p1 ORF type:5prime_partial len:764 (+),score=25.24,AAA|PF00004.25|1.6e-08 R_Transcript_127203:1-2292(+)
TLTTEKRIDQIQILLSLTHSDHLSKNDSGYQMIEQPGAIYLRYLVDIHKKYLMNYEFNTSCLAERRVFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKGFRIDDSDDIDANDDIDTSDDIDASDDIDRDLDTELELLTMMDALTMDIMPEIDQFYITLQVELAKAMSPCIIWIPNIHDLDVNKSNYLSLGLLVNYLSRDCERWSTRNILVIASTHIPQKVDPALIALNQLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKLTILLYLLSCSAGSVAQDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEIEGALVGSSRTEKDCSQFDNDRVTLLLRPELRNPLDMMQNGSCSILDHRFLYEKYESELEEGEGALDPQQIEEDLFNHIVWAPRIWNPWGFLFDCIERPNELGFPYWARSFRGKRIIYDEEDELQENDSEFLQSGTLQYQTRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQMDPPTSIYKRWFIKNTQEKHFELLINRQRWLRTNSSLSNGSFRSNTLSESYRYLSNLFLSNGTLLDQMTKTLLRKRWLFSDEMKIGFM*

Click here to download the sequence:
Link to NCBI Protein BLAST