Transcript Information: R_Transcript_127447.p1


Annotated TAIR IDAT5G38700.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15489690-15490238 | Forward length=182
E-Value5E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5468610978575
Replicate 21.6607243267128
Replicate 30.77649957953059
Condition 2: 8 Hour
Replicate 10.8300293202456
Replicate 20.88432866038587
Replicate 31.640823558905
Condition 3: 24 Hour
Replicate 10
Replicate 21.370665806759
Replicate 32.5968463187844


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_127447.p1 GENE.R_Transcript_127447~~R_Transcript_127447.p1 ORF type:complete len:177 (+),score=37.12,DUF761|PF05553.7|3.6e-10 R_Transcript_127447:399-929(+)
ATGGGAATAAACCAGAGATCATTGTCAGGTAATGAAGCAACCCGCAGAGCTTGGAGGCTCTTGCGCCTGGCCCTGCTATGGGCCAGGAAAGGCGGGTTGCTAAAATGCCGGCTCATGGCGGAGATCCGGCACGTGCCCAAGTACTTAAAGGGCTTAAACCACAACAAGCATTCAAGAGACATGATAAGGTATGGTGAAAGAGAGCTCTCATTTGATGAGACACCAGTCATACACCTTAAAATGAGTAGACCTGCCTCATTGAGGTTCATGATCCCCTGCATCAAGCCTGATGTGGTTGACTTTGACTATGACTTTGCTCACCATGATGATTATCTTGATGATCATGATGTTGGATGGGGATGCTATAACATAGCACATGATCATCATCATTATCATCATCATCATGAAGAGATTGTTAAAGAGAATGAAGAATGTGAAGATGAGATGATTGATGATAAAGCAGAGGAGTTCATTGCTAAGTTCTATCAACAAATAAAGCTCCAAAGAGAGCTCATTTCAAAGAAGACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_127447.p1 GENE.R_Transcript_127447~~R_Transcript_127447.p1 ORF type:complete len:177 (+),score=37.12,DUF761|PF05553.7|3.6e-10 R_Transcript_127447:399-929(+)
MGINQRSLSGNEATRRAWRLLRLALLWARKGGLLKCRLMAEIRHVPKYLKGLNHNKHSRDMIRYGERELSFDETPVIHLKMSRPASLRFMIPCIKPDVVDFDYDFAHHDDYLDDHDVGWGCYNIAHDHHHYHHHHEEIVKENEECEDEMIDDKAEEFIAKFYQQIKLQRELISKKT*

Click here to download the sequence:
Link to NCBI Protein BLAST