Transcript Information: R_Transcript_127486.p1


Annotated TAIR IDAT5G52560.1
Annotated Gene NameUDP-sugar pyrophosphorylase
Annotated Gene Symbol(s)ATUSP, USP
Annotation TypeOrtholog
Chromosome Positionchr5:21331230-21334573 | Forward length=614
E-Value2.4E-224
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53685179278585
Replicate 20.3969888734174
Replicate 30.24061699155622
Condition 2: 8 Hour
Replicate 10.51440892746313
Replicate 20.98650949299348
Replicate 30.91520725817077
Condition 3: 24 Hour
Replicate 10.53053756198476
Replicate 20.97302612752547
Replicate 31.5174249047639


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_127486.p1 GENE.R_Transcript_127486~~R_Transcript_127486.p1 ORF type:complete len:476 (+),score=104.74,UDPGP|PF01704.14|1.5e-15 R_Transcript_127486:283-1710(+)
ATGGCGTCCGTCACCGACACGCTCGCTAATCTCAGCATTGACGACCTCAATTGCCCTAATCTCCAGAAGAATCTCAAACTTCTCTCTCCTCAACATGTGGAGTTAGCGAAGATGTTGATTGAGAATGGACAGTGTCATCTCTTTGATGACTGGCCTGAACCTGGTGTTGATGATGACGAGAAACGTGCCTTCTTTGATCAGGTTGCCCTTCTTAATGGAAGCTACCCTGGTGGTCTTGTACAGTACATAAAAAATGCACGAGAGCTCCTAGCAGATTCAAAAGCAGGGAAGAATCCCTTTGATGGCTTTACGCCTTCAGTGCCAACTGGTGAGAATTTGACTTTTGCGGATGATAATTTCATAAAATACGAAGAGATAGGCGTTAAGGAAGCCAAAAATGCTGCATTTGTTCTTGTTGCTGGTGGACTTGGGGAACGTCTTGGGTACAATGGAATCAAGGTTGCCCTGCCATCAGAAACTTCCACAGGAACATGTTTCTTACAGCTTTACATAGAGGCAATTCTTGCTCTTCAAGAAGCTAGCTGCAAGTTGGCTGGAGGTGAACCTCAGGAGATACCTTTTGCTATTATGACTTCTGATGACACGCATGCACGCACATTGGAGCTTCTTGAGACTAATGCTTATTTTGGGATGAAATCCACACAAGTCACACTCCTAAAGCAGGAAAAAGTTGCCTGCTTAGCTGACAATGATGCCAAGCTTGCAGTGGACCCAAAAAATAAATACAGAATTCAGACAAAACCTCATGGCCACGGTGATGTGCATTCACTTTTATATTCAACCGGCCTTGTGTACAAATGGCGTGATGCTGGTGTGAAATGGGTTTTGTTCTTCCAGGATACAAATGGACTTCTGTTCAAGGCAATTCCAGCATCATTGGGGGTCAGTGCCACCAAGCAATACCAGGTTAACTCCCTTGCAGTTCCACGTAAGGCAAAAGAAGCTATTGGAGGCATTGCTAAACTTACCCATGCTGATGGGAGGTCAATGGTGATCAATGTGGAGTACAATCAGCTTGATCCTCTGCTTAGAGCAACTATAAACCCTGAAGGAGATGTCAACTGTGAGACTGGATTCTCACCTTTTCCTGGAAATATTAATCAGTTAATTTTGGAACTTGAATCATACATTGAGGAACTGAAGAAAACAGGTGGTGCCATCAAGGAGTTTGTTAACCCAAAGTATTTTCCCTTTTTCACTAAATTTCATATTATTCAAATACAGTGTAATACGTTAAAGATTAAGGAGGTCATGTTGTTTCTGTCCATTAGAGCATGTTTAGTGCCCAATATTAGATTTAGGAAAACAAACTGTAAAGGAATGAGAAAGAAAGTAAACAAATTGATAGAATTGGCAGCTCCCTTCCTCCGTCAACAGATCCATGGGATAAAGGGAAGAAGTCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_127486.p1 GENE.R_Transcript_127486~~R_Transcript_127486.p1 ORF type:complete len:476 (+),score=104.74,UDPGP|PF01704.14|1.5e-15 R_Transcript_127486:283-1710(+)
MASVTDTLANLSIDDLNCPNLQKNLKLLSPQHVELAKMLIENGQCHLFDDWPEPGVDDDEKRAFFDQVALLNGSYPGGLVQYIKNARELLADSKAGKNPFDGFTPSVPTGENLTFADDNFIKYEEIGVKEAKNAAFVLVAGGLGERLGYNGIKVALPSETSTGTCFLQLYIEAILALQEASCKLAGGEPQEIPFAIMTSDDTHARTLELLETNAYFGMKSTQVTLLKQEKVACLADNDAKLAVDPKNKYRIQTKPHGHGDVHSLLYSTGLVYKWRDAGVKWVLFFQDTNGLLFKAIPASLGVSATKQYQVNSLAVPRKAKEAIGGIAKLTHADGRSMVINVEYNQLDPLLRATINPEGDVNCETGFSPFPGNINQLILELESYIEELKKTGGAIKEFVNPKYFPFFTKFHIIQIQCNTLKIKEVMLFLSIRACLVPNIRFRKTNCKGMRKKVNKLIELAAPFLRQQIHGIKGRSQ*

Click here to download the sequence:
Link to NCBI Protein BLAST